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| Rebholz-Schuhmann, D., Pezik, P., Lee, V., Kim, J-J., del Gratta, R., Sasaki, Y., McNaught, J., Montemagni, S., Monachini, M., Calzolari, N. en Ananiadou, S., BioLexicon: Towards a Reference Terminological Resource in the Biomedical Domain, in: Proceedings of the of the 16th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB-2008), 2008
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| Okazaki, N., Tsuruoka, Y., Ananiadou, S. en Tsujii, J., A Discriminative Candidate Generator for String Transformations, in: Proceedings of the 2008 Conference on Empirical Methods in Natural Language Processing (EMNLP 2008), pagina's 447-456, 2008
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| Oda, K., Kim, J.-D., Ohta, T., Okanohara, D., Matsuzaki, T., Tateisi, Y. en Tsujii, J., New challenges for text mining: Mapping between text and manually curated pathways (2008), in: BMC Bioinformatics, 9:Suppl 3(S5)
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| Nobata, C., Cotter, P., Okazaki, N., Rea, B., Sasaki, Y., Tsuruoka, Y., Tsujii, J. en Ananiadou, S., Kleio: a knowledge-enriched information retrieval system for biology, in: Proceedings of the 31st annual international ACM SIGIR conference on Research and development in information retrieval, Singapore, Singapore, pagina's 787--788, ACM, 2008
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| Miyao, Y., Sætre, R., Sagae, K., Matsuzaki, T. en Tsujii, J., Task-Oriented Evaluation of Syntactic Parsers and Their Representations, in: Proceedings of ACL-08:HLT, pagina's 46-54, 2008
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| Kim, J.-D., Ohta, T., Oda, K. en Tsujii, J., From Text to Pathway: Corpus Annotation for Knowledge Acquisition from Biomedical Literature, in: Proceedings of the 6th Asia Pacific Bioinformatics Conference, pagina's 165-176, Imperial College Press, 2008
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| Sasaki, Y., Montemagni, S., Pezik, P., Rebholz-Schuhmann, D., McNaught, J. en Ananiadou, S., BioLexicon: A Lexical Resource for the Biology Domain, in: Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008), Turku, Finland, pagina's 109--116, Turku Centre for Computer Science (TUCS), 2008
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| Kano, Y., Nguyen, N. T. H., Sætre, R., Yoshida, K., Fukamachi, K., Miyao, Y., Tsuruoka, Y., Ananiadou, S. en Tsujii, J., Towards Data And Goal Oriented Analysis: Tool Inter-Operability And Combinatorial Comparison, in: Proceedings of the 3rd International Joint Conference on Natural Language Processing (IJCNLP-2008), pagina's 859-864, 2008
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| Kano, Y., Nguyen, N. T. H., Sætre, R., Yoshida, K., Miyao, Y., Tsuruoka, Y., Matsubayashi, Y., Ananiadou, S. en Tsujii, J., Filling the gaps between tools and users: a tool comparator, using protein-protein interaction as an example., in: Proceedings of the Pacific Symposium on Biocomputing 2008 (PSB 2008), pagina's 616--627, 2008
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| Hirohata, K., Okazaki, N., Ananiadou, S. en Ishizuka, M., Identifying Sections in Scientific Abstracts using Conditional Random Fields, in: Proceedings of the 3rd International Joint Conference on Natural Language Processing (IJCNLP 2008), pagina's 381-388, 2008
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