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Publications of Tsujii, J. sorted by recency
| , , , , , and , Automatic Recognition of Topic-Classified Relations between Prostate Cancer and Genes from Medline Abstracts, in: Proceedings of the Second International Symposium on Semantic Mining in Biomedicine, pages 5-12, 2006 |
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| , , , , , and , Extraction of Gene-Disease Relations from MedLine using Domain Dictionaries and Machine Learning, in: Proceedings of the Pacific Symposium on Biocomputing (PSB) 11, pages 4-15, 2006 |
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| , and , Text mining and its potential applications in systems biology (2006), in: Trends in Biotechnology, 24:12(571 - 579) |
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| , and , Ontology based Semantic Annotation for Knowledge Extraction, in: 2nd International Digital Curation Conference, 2006 |
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| and , Reranking for Biomedical Named-Entity Recognition, in: Proceedings of BioNLP 2007: Biological, translational, and clinical language processing, pages 209--216, 2007 |
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| , , and , Ambiguous Part-of-Speech Tagging for Improving Accuracy and Domain Portability of Syntactic Parsers, in: Proceedings of the Twentieth International Joint Conference on Artificial Intelligence (IJCAI-07), pages 1783-1788, 2007 |
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| , , and , Learning string similarity measures for gene/protein name dictionary look-up using logistic regression (2007), in: Bioinformatics, 23:20(2768-2774) |
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| and , Dependency parsing and domain adaptation with LR models and parser ensembles, in: Proceedings of the CoNLL 2007 Shared Task in the Joint Conferences on Empirical Methods in Natural Language Processing and Computational Natural Language Learning (EMNLP-CoNLL'07 shared task), pages 1044-1050, 2007 |
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| , and , HPSG parsing with shallow dependency constraints, in: Proceedings of the 44th Meeting of the Association for Computational Linguistics, pages 624--631, 2007 |
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| , and , Syntactic features for protein-protein interaction extraction, in: Short Paper Proceedings of the 2nd International Symposium on Languages in Biology and Medicine (LBM 2007), pages 6.1-6.14, CEUR Workshop Proceedings (CEUR-WS.org), 2008 |
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| and , A discriminative language model with pseudo-negative samples, in: Proceedings of the 45th Annual Meeting of the Association of Computational Linguistics (ACL 2007), pages 73--80, Association for Computational Linguistics, 2007 |
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| , , and , A log-linear model with an n-gram reference distribution for accurate HPSG parsing, in: Proceedings of the Tenth International Conference on Parsing Technologies (IWPT), Prague, Czech Republic, pages 60--68, 2007 |
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| , and , Towards Framework-Independent Evaluation of Deep Linguistic Parsers, in: Proceedings of Grammar Engineering across Frameworks (GEAF2007), pages 238--258, CSLI Publications, 2007 |
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| , and , Efficient HPSG Parsing with Supertagging and CFG-filtering, in: Proceedings of the Twentieth International Joint Conference on Artificial Intelligence (IJCAI-07), pages 1671-1676, 2007 |
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| , and , Framework independent summarized parser output and its documentation, in: Proceedings of grammar engineering across framework 2007 (GEAF07), pages 319--331, 2007 |
| , and , Evaluating Impact of Re-training a Lexical Disambiguation Model on Domain Adaptation of an HPSG Parser, in: Proceedings of the Tenth International Conference on Parsing Technologies (IWPT 2007), pages 11--22, 2007 |
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| , , , , , , and , SemText: a semantically enriched information retrieval system for biology, in: Proceedings of the 8th International Conference on Systems Biology (ICSB 2007), 2007 |
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| , , and , Move Prediction in Go with the Maximum Entropy Method, in: 2007 IEEE Symposium on Computational Intelligence and Games, pages 189-195, 2007 |
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| , and , Fast Full Parsing by Linear-Chain Conditional Random Fields, in: Proceedings of the 12th Conference of European Chapter of the Association for Computational Linguistics (EACL-09), pages 790--798, 2009 |
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| , , , , , and , U-Compare: share and compare text mining tools with UIMA (2009), in: Bioinfomatics, 25:15(1997--1998) |
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| , and , Stochastic Gradient Descent Training for L1-regularized Log-linear Models with Cumulative Penalty, in: ACL-IJCNLP 2009, pages 477--485, 2009 |
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| , , and , Integrated NLP Evaluation System for Pluggable Evaluation Metrics with Extensive Interoperable Toolkit, in: Proceedings of the NAACL HLT Workshop on Software Engineering, Testing, and Quality Assurance for Natural Language Processing, pages 22--30, 2009 |
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| , and , Accelerating the Annotation of Sparse Named Entities by Dynamic Sentence Selection, in: Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing (BioNLP 2008), pages 30--37, Association for Computational Linguistics, 2008 |
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| , and , Accelerating the annotation of sparse named entities by dynamic sentence selection (2008), in: BMC Bioinformatics, 9:Suppl 11(S8) |
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| , and , FACTA: a text search engine for finding associated biomedical concepts (2008), in: Bioinformatics, 24:21(2259-60) |
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