Ananiadou, S. - NaCTeM Publications

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Achternamen:	Ananiadou

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Miwa, M. en Ananiadou, S., NaCTeM EventMine for BioNLP 2013 CG and PC tasks, in: Proceedings of BioNLP Shared Task 2013 Workshop, Sofia, Bulgaria, pagina's 94-98, Association for Computational Linguistics, 2013

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Wang, X., Rak, R., Restificar, A., Nobata, C., Rupp, C. J., Batista-Navarro, R., Nawaz, R. en Ananiadou, S., NaCTeM Systems for BioCreative III PPI Tasks, in: Proceedings of the BioCreative III Workshop, pagina's 142-147, 2010

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Rak, R., Batista-Navarro, R., Rowley, A., Miwa, M., Carter, J. en Ananiadou, S., NaCTeMâ€™s BioC Modules and Resources for BioCreative IV, in: Proceedings of the Fourth BioCreative Challenge Evaluation Workshop, Bethesda, Maryland, USA, pagina's 61-67, 2013

Ananiadou, S., Sullivan, D., Black, W.J., Levow, G., Gillespie, J., Mao, C., Pyysalo, S., Kolluru, B., Tsujii, J. en Sobral, B., Named Entity Recognition for Bacterial Type IV Secretion Systems (2011), in: PLoS ONE, 6:3(e14780)

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Trieu, H-L., Miwa, M. en Ananiadou, S., Named Entity Recognition for Cancer Immunology Research Using Distant Supervision, in: Proceedings of BioNLP 2022, pagina's 171-177, 2022

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Zhang, T., Schoene, A en Ananiadou, S., Natural Language Processing Applied to Mental Illness Detection: A Narrative Review (2022), in: n p j Digital Medicine, 5(46)

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Yang, K, Leng, Y., Zhang, X., Zhang, T., Thompson, P., Keavney, B., Tomaszewski, M. en Ananiadou, S., Natural Language Processing for Cardiology: A Narrative Review, arXiv, 2025

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Nawaz, R., Thompson, P. en Ananiadou, S., Negated BioEvents: Analysis and Identification (2013), in: BMC Bioinformatics, 14:1(14)

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Min, E., Rong, Y, Xu, T., Bian, Y., Zhao, Y., Da, L., Lin, K., Ananiadou, S. en Huang, J., Neighbour Interaction based Click-Through Rate Prediction via Graph-masked Transformer, in: Proceedings of SIGIR 2022, pagina's 353-362, 2022

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Wang, K., Stevens, R., Alachram, H., Li, Y., Soldatova, L. N., King, R. D., Ananiadou, S., Schoene, A, Li, M., Christopoulou, F., Ambite, J. L., Matthew, J., Garg, S., Hermjakob, U., Marcu, D., Sheng, E., Beissbarth, T., Wingender, E., Galstyan, A., Gao, X., Chambers, B., Pan, W., Khomtchouk, B. B., Evans, J. A. en Rzhetsky, A., NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding (2021), in: npj systems biology and applications, 7(38)

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Li, M. en Ananiadou, S., Neural Architectures for Aggregating Sequence Labels from Multiple Annotators (2022), in: Neurocomputing

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Yu, Z. en Ananiadou, S., Neuron-Level Knowledge Attribution in Large Language Models, in: Proceedings of the 2024 Conference on Empirical Methods in Natural Language Processing, pagina's 3267–3280, 2024

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Pyysalo, S., Stenetorp, P., Ohta, T., Kim, J.-D. en Ananiadou, S., New Resources and Perspectives for Biomedical Event Extraction, in: Proceedings of BioNLP 2012, pagina's 100-108, 2012

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Thompson, P., Nawaz, R., Korkontzelos, I., Black, W.J., McNaught, J. en Ananiadou, S., News Search Using Discourse Analytics, in: Proceedings of the 2013 Digital Heritage International Congress, Marseille, France, pagina's 597-604, IEEE, 2013

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Hu, G., Qin, K., Yuan, C., Peng, M., Lopez-Lira, A., Wang, B., Ananiadou, S., Huang, J. en Xie, Q., No Language is an Island: Unifying Chinese and English in Financial Large Language Models, Instruction Data, and Benchmarks, arXiv, 2024

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Tsuruoka, Y., McNaught, J. en Ananiadou, S., Normalizing biomedical terms by minimizing ambiguity and variability (2008), in: BMC Bioinformatics, 9:Suppl 3(S2)

Leroi, A. M., Lambert, B. C., Mauch, M., Papadopoulou, M., Ananiadou, S., Lindberg, S. I. I. en Lindenfors, P., On Revolutions (2018), in: V-Dem Working Paper(63)

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Leroi, A. M., Lambert, B. C., Mauch, M., Papadopoulou, M., Ananiadou, S., Lindberg, S. I. I. en Lindenfors, P., On revolutions (2020), in: Palgrave Communications, 6(4)

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Tran, T. T., Le, P. en Ananiadou, S., One-shot to Weakly-Supervised Relation Classification using Language Models, in: Proceedings of the 3rd Conference on Automated Knowledge Base Construction, 2021

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Kim, J.-D., Ananiadou, S. en Tsujii, J., Ontology based Semantic Annotation for Knowledge Extraction, in: 2nd International Digital Curation Conference, 2006

Ohta, T., Pyysalo, S., Tsujii, J. en Ananiadou, S., Open-domain Anatomical Entity Mention Detection, in: Proceedings of the ACL Workshop on Detecting Stucture in Scholarly Discourse (DSSD), pagina's 27-36, 2012

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Xie, Q., Li, D., Xiao, M., Jiang, Y., Xiang, R., Zhang, X., Chen, Z., He, Y., Han, W., Yang, Y., Chen, S., Zhang, Y., Shen, L., Kim, D., Liu, Z., Luo, Z., Yu, Y., Cao, Y., Deng, Z., Yao, Z., Li, H., Feng, D., Dai, Y., Somasundaram, V., Lu, P., Zhao, Y., Long, Y., Xiong, G., Smith, K., Yu, H., Lai, Y., Peng, M., Nie, J., Suchow, J., Liu, X. -Y., Wang, B., Lopez-Lira, A., Huang, J. en Ananiadou, S., Open-FinLLMs: Open Multimodal Large Language Models for Financial Applications, arXiv, 2024

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Batista-Navarro, R., Rak, R. en Ananiadou, S., Optimising chemical named entity recognition with pre-processing analytics, knowledge-rich features and heuristics (2015), in: Journal of Cheminformatics, 7:Suppl 1(S6)

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Almeida, B., Ananiadou, S., Bagnato, A., Barbero, A. B., Di Rocco, J., Di Ruscio, D., Kolovos, D. S., Korkontzelos, I., Hansen, S., Malo, P., Matragkas, N., Paige, R. F. en Vinju, J., OSSMETER: Automated Measurement and Analysis of Open Source Software, in: Proceedings of the Projects Showcase at the Software Technologies: Applications and Foundations 2015 (STAF 2015), 2015

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Goldsack, T., Luo, Z., Xie, Q., Scarton, C., Shardlow, M., Ananiadou, S. en Lin, C., Overview of the BioLaySumm 2023 Shared Task on Lay Summarization of Biomedical Research Articles, in: Proceedings of the 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks, pagina's 468-477, 2024

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