Ananiadou, S. - NaCTeM Publications - Aigaion 2.0

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First name(s):	S.
Last name(s):	Ananiadou

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Batista-Navarro, R., Carter, J. and Ananiadou, S., Semi-automatic curation of chronic obstructive pulmonary disease phenotypes using Argo, in: Proceedings of the Fifth BioCreative Challenge Evaluation Workshop, Seville, Spain, pages 403-408, 2015

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MihÄƒilÄƒ, C. and Ananiadou, S., Semi-supervised learning of causal relations in biomedical scientific discourse (2014), in: BioMedical Engineering OnLine, 13:Suppl 2(S1)

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Ananiadou, S., Cotter, P., Nobata, C., Okazaki, N., Rea, B., Sasaki, Y., Tsuruoka, Y. and Tsujii, J., SemText: a semantically enriched information retrieval system for biology, in: Proceedings of the 8th International Conference on Systems Biology (ICSB 2007), 2007

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Piao, S., Tsuruoka, Y. and Ananiadou, S., Sentiment Analysis with Knowledge Resource and NLP Tools (2009), in: The International Journal of Interdisciplinary Social Sciences, 4:5(17--28)

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Zhang, T., Yang, K and Ananiadou, S., Sentiment-guided Transformer with Severity-aware Contrastive Learning for Depression Detection on Social Media, in: Proceedings of BioNLP 2023, pages 114–126, 2023

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Kano, Y., Nguyen, N. T. H., SÃ¦tre, R., Fukamachi, K., Yoshida, K., Miyao, Y., Tsuruoka, Y., Ananiadou, S. and Tsujii, J., Sharable type system design for tool inter-operability and combinatorial comparison, in: Proceedings of the First International Conference on Global Interoperability for Language Resources (ICGL), pages 122--129, 2008

Williams, J., Matragkas, N., Kolovos, D. S., Korkontzelos, I., Ananiadou, S. and Paige, R. F., Software Analytics for MDE Communities, in: Proceedings of the Open Source Software for Model Driven Engineering Workshop (OSS4MDEâ€™14), 2014

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Nawaz, R., Thompson, P. and Ananiadou, S., Something old, something new: identifying knowledge source in bio-events (2013), in: International Journal of Computational Linguistics and Applications, 4:1(129-144)

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Nguyen, N. T. H., Miwa, M. and Ananiadou, S., Span-based Named Entity Recognition by Generating and Compressing Information, in: Proceedings of EACL 2023, pages 1984–1996, 2023

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Alhuzali, H. and Ananiadou, S., SpanEmo: Casting Multi-label Emotion Classification as Span-prediction, in: Proceedings 16th conference of the European Chapter of the Association for Computational Linguistics (EACL 2021), pages 1573–1584, 2021

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Tsuruoka, Y., Tsujii, J. and Ananiadou, S., Stochastic Gradient Descent Training for L1-regularized Log-linear Models with Cumulative Penalty, in: ACL-IJCNLP 2009, pages 477--485, 2009

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Vasilakes, J., Zerva, C. and Ananiadou, S., Subjective Logic Encodings, arXiv, 2025

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Zhang, T., Yang, K, Ji, S., Liu, B, Xie, Q. and Ananiadou, S., SuicidEmoji: Derived Emoji Dataset and Tasks for Suicide-Related Social Content, in: Proceedings of the 47th International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR '24), pages 1136 - 1141, 2024

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Ananiadou, S. and Thompson, P., Supporting Biological Pathway Curation Through Text Mining, in: Data Analytics and Management in Data Intensive Domains, pages 59-73, Springer, 2017

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Thompson, P., Boylan, K., Freemont, A. and Ananiadou, S., Supporting biomarker discovery using text mining, in: Proceedings of Informatics for Health 2017, 2017

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Ananiadou, S., Weissenbacher, D., Rea, B., Pieri, E., Lin, Y., Vis, F., Procter, R. and Halfpenny, P., Supporting Frame Analysis using Text Mining, in: Proceedings of the 5th International Conference on e-Social Science, 2009

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Mo, Y., Kontonatsios, G. and Ananiadou, S., Supporting Systematic Reviews Using LDA-based Document Representations (2015), in: Systematic Reviews, 4(172)

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Ananiadou, S., Okazaki, N., Procter, R., Rea, B. and Thomas, J., Supporting Systematic Reviews using Text Mining (2009), in: Social Science Computer Review, 27:4(509-523)

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Ananiadou, S., Procter, R., Rea, B., Sasaki, Y. and Thomas, J., Supporting Systematic Reviews using Text Mining, in: Proceedings of the 3rd International Conference on e-Social Science, 2007

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Ananiadou, S., Thompson, P., Thomas, J., Mu, T., Oliver, S., Rickinson, M., Sasaki, Y., Weissenbacher, D. and McNaught, J., Supporting the Education Evidence Portal via Text Mining (2010), in: Philosophical Transactions of the Royal Society A, 368:1925(3829-3844)

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Thompson, P., Ananiadou, S., Basinas, I., Brinchmann, B. C., Cramer, C., Galea, K. S., Ge, C., Georgiadis, P., Kirkeleit, J., Kuijpers, E., Nguyen, N. T. H., Nuñez, R., Schlünssen, V., Stokholm, Z. A., Taher, E. A., Tinnerberg, H., van Tongeren, M. and Xie, Q., Supporting the working life exposome: Annotating occupational exposure for enhanced literature search (2024), in: PLoS ONE, 19:8(e0307844)

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Zhang, X., Wei, Q., Zhu, Y., Zhang, L., Zhou, D. and Ananiadou, S., SynGraph: A Dynamic Graph-LLM Synthesis Framework for Sparse Streaming User Sentiment Modeling, in: Findings of the Association for Computational Linguistics: ACL 2025, pages 16338–16356, 2025

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Tran, T. T., Miwa, M. and Ananiadou, S., Syntactically-Informed Word Representations from Graph Neural Network (2020), in: Neurocomputing, 413(431-443)

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Yuan, C., Xie, Q. and Ananiadou, S., Temporal relation extraction with contrastive prototypical sampling (2024), in: Knowledge-based Systems, 286(111410)

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