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| Sasaki, Y., Montemagni, S., Pezik, P., Rebholz-Schuhmann, D., McNaught, J. and Ananiadou, S., BioLexicon: A Lexical Resource for the Biology Domain, in: Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008), Turku, Finland, páginas 109--116, Turku Centre for Computer Science (TUCS), 2008
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| Sasaki, Y., Thompson, P., Cotter, P., McNaught, J. and Ananiadou, S., Event Frame Extraction Based on a Gene Regulation Corpus, in: Proceedings of the 22nd International Conference on Computational Linguistics (Coling 2008), páginas 761--768, Coling 2008 Organizing Committee, 2008
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| Sasaki, Y., Thompson, P., McNaught, J. and Ananiadou, S., Three BioNLP Tools Powered by the BioLexicon, in: Proceeedings of EACL 2009 Demonstration Session, páginas 61--64, 2009
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| Sasaki, Y., Thompson, P., McNaught, J. and Ananiadou, S., Biological Event Recognition with Textual Induction, in: Proceedings of 3rd International Symposium on Languages in Biology and Medicine (LBM-2009), páginas 91--96, 2009
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| Sasaki, Y., Tsuruoka, Y., McNaught, J. and Ananiadou, S., How to Make the Most of NE Dictionaries in Statistical NER, in: Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing (BioNLP 2008), páginas 63--70, Association for Computational Linguistics, 2008
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| Sato, M., Brockmeier, A. J., Kontonatsios, G., Mu, T., Goulermas, J. Y, Tsujii, J. and Ananiadou, S., Distributed Document and Phrase Co-embeddings for Descriptive Clustering, in: Proceedings of EACL, páginas 991-1001, 2017
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| Sætre, R., Kazuhiro, Y., Miwa, M., Matsuzaki, T., Kano, Y. and Tsujii, J., AkaneRE Relation Extraction: Protein Interaction and Normalization in the BioCreAtIvE II.5 Challenge, in: BioCreative II.5 Workshop 2009 special session | Digital Annotations, páginas 33, CNIO, 2009
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| Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. and Tsujii, J., Connecting Text Mining and Pathways using the PathText Resource, in: Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008), páginas 1736-1740, European Language Resources Association (ELRA), 2008
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| Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. and Tsujii, J., PathText: Text Mining Tools Integrated with Biological Pathway, in: Genomes to Systems Conference 2008 Handbook, páginas 65, The Consortium for Post-Genome Science, 2008
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| Sætre, R., Miwa, M., Yoshida, K. and Tsujii, J., From Protein-Protein Interaction to Molecular Event Extraction, in: Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, páginas 103--106, 2009
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| Sætre, R., Yoshida, K., Miwa, M., Matsuzaki, T., Kano, Y. and Tsujii, J., Extracting Protein-Interactions from Text with the Unified AkaneRE Event Extraction System (2010), in: Transactions on Computational Biology and Bioinformatics (TCBB), BioCreative II.5 Special Issue, 7:3(442-453)
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| Schoene, A, Bojanic, L., Nghiem, M-. Q., Hunt, I. M. and Ananiadou, S., Classifying suicide-related content and emotions on Twitter using Graph Convolutional Neural Networks (2022), in: IEEE Transactions on Affective Computing(1-12)
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| Shardlow, M., Batista-Navarro, R., Thompson, P., Nawaz, R., McNaught, J. and Ananiadou, S., Identification of Research Hypotheses and New Knowledge from Scientific Literature (2018), in: BMC Medical Informatics and Decision Making, 18(46)
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| Shardlow, M., Ju., M., Li, M., O'Reilly, C., Iavarone, E., McNaught, J. and Ananiadou, S., A Text Mining Pipeline Using Active and Deep Learning for Curating Information in Computational Neuroscience (2018), in: Neuroinformatics
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| Shardlow, M., Nguyen, N. T. H., Owen, G., Turner, S., O'Donovan, C., Leach, A., McNaught, J. and Ananiadou, S., A New Corpus to Support Text Mining for the Curation of Metabolites in the ChEBI Database, in: Proceedings of LREC 2018, páginas 280-285, 2018
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| Shardlow, M., Przybyɫa, P., Batista-Navarro, R., Carter, J., McNaught, J. and Ananiadou, S., Facilitating and promoting web annotation with Argo, in: Proceedings of I Annotate 2016, 2016
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