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Thew, S., Sutcliffe, A., de Bruijn, O., McNaught, J., Procter, R., Venters, C.C. and Buchan, I., Experience in e-Science Requirements Engineering, pages 277-282, 2008

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Thew, S., Sutcliffe, A., Procter, R., de Bruijn, O., McNaught, J., Venters, C.C. and Buchan, I., Requirements Engineering for E-science: Experiences in Epidemiology (2009), in: IEEE Software, 26:1(80-87)

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Thomas, J., McNaught, J. and Ananiadou, S., Applications of text mining within systematic reviews (2011), in: Research Synthesis Methods, 2:1(1-14)

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Thompson, P. and Ananiadou, S., HYPHEN: A flexible, hybrid method to map phenotype concept mentions to terminological resources (2018), in: Terminology, 24:1(91-121)

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Thompson, P. and Ananiadou, S., Extracting Gene-Disease Relations from Text to Support Biomarker Discovery, in: Proceedings of the 7th International conference on Digital Health, pages 180-189, 2017

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Thompson, P., Ananiadou, S., Basinas, I., Brinchmann, B. C., Cramer, C., Galea, K. S., Ge, C., Georgiadis, P., Kirkeleit, J., Kuijpers, E., Nguyen, N. T. H., Nuñez, R., Schlünssen, V., Stokholm, Z. A., Taher, E. A., Tinnerberg, H., van Tongeren, M. and Xie, Q., Supporting the working life exposome: Annotating occupational exposure for enhanced literature search (2024), in: PLoS ONE, 19:8(e0307844)

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Thompson, P., Ananiadou, S. and Tsujii, J., The GENIA Corpus: Annotation Levels and Applications, in: Handbook of Linguistic Annotation, pages 1395-1432, Springer, 2017

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Thompson, P., Batista-Navarro, R., Kontonatsios, G., Carter, J., Toon, E., McNaught, J., Timmermann, C., Worboys, M. and Ananiadou, S., Text Mining the History of Medicine (2016), in: PLOS One, 11:1(e0144717)

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Thompson, P., Boylan, K., Freemont, A. and Ananiadou, S., Supporting biomarker discovery using text mining, in: Proceedings of Informatics for Health 2017, 2017

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Thompson, P., Carter, J., McNaught, J. and Ananiadou, S., Semantically Enhanced Search System for Historical Medical Archives, in: Proceedings of DigitalHeritage 2015, pages 387 - 390, 2015

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Thompson, P., Cotter, P., McNaught, J., Ananiadou, S., Montemagni, S., Trabucco, A. and Venturi, G., Building a Bio-Event Annotated Corpus for the Acquisition of Semantic Frames from Biomedical Corpora, in: Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008), pages 2159--2166, European Language Resources Association (ELRA), 2008

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Thompson, P., Daikou, S., Ueno, K., Batista-Navarro, R., Tsujii, J. and Ananiadou, S., Annotation and Detection of Drug Effects in Text for Pharmacovigilance (2018), in: Journal of Cheminformatics, 10(37)

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Thompson, P., Iqbal, S. A., McNaught, J. and Ananiadou, S., Construction of an annotated corpus to support biomedical information extraction (2009), in: BMC Bioinformatics, 10(349)

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Thompson, P., Kano, Y., McNaught, J., Pettifer, S., Attwood, T. K., Keane, J. and Ananiadou, S., Promoting Interoperability of Resources in META-SHARE, in: Proceedings of the IJCNLP Workshop on Language Resources, Technology and Services in the Sharing Paradigm (LRTS), pages 50-58, 2011

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Thompson, P., McNaught, J. and Ananiadou, S., Customised OCR Correction for Historical Medical Text, in: Proceedings of DigitalHeritage 2015, pages 35 - 42, 2015

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Thompson, P., McNaught, J., Montemagni, S., Calzolari, N., del Gratta, R., Lee, V., Marchi, S., Monachini, M., Pezik, P., Quochi, V., Rupp, C. J., Sasaki, Y., Venturi, G., Rebholz-Schuhmann, D. and Ananiadou, S., The BioLexicon: a large-scale terminological resource for biomedical text mining (2011), in: BMC Bioinformatics, 12(397)

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Thompson, P., Nawaz, R., Korkontzelos, I., Black, W.J., McNaught, J. and Ananiadou, S., News Search Using Discourse Analytics, in: Proceedings of the 2013 Digital Heritage International Congress, Marseille, France, pages 597-604, IEEE, 2013

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Thompson, P., Nawaz, R., McNaught, J. and Ananiadou, S., Enriching News Events with Meta-knowledge Information (2016), in: Language Resources and Evaluation, 51:2(409-438)

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Thompson, P., Nawaz, R., McNaught, J. and Ananiadou, S., Enriching a biomedical event corpus with meta-knowledge annotation (2011), in: BMC Bioinformatics, 12(393)

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Thompson, P., Venturi, G., McNaught, J., Montemagni, S. and Ananiadou, S., Categorising Modality in Biomedical Texts, in: Proceedings of the LREC 2008 Workshop on Building and Evaluating Resources for Biomedical Text Mining., pages 27--34, 2008

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Thompson, P., Yates, T., Inan, E. and Ananiadou, S., Semantic Annotation for Improved Safety in Construction Work, in: Proceedings of LREC 2020, pages 1983‑1992, 2020

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Tran, T. T., Le, P. and Ananiadou, S., One-shot to Weakly-Supervised Relation Classification using Language Models, in: Proceedings of the 3rd Conference on Automated Knowledge Base Construction, 2021

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Tran, T. T., Le, P. and Ananiadou, S., Revisiting Unsupervised Relation Extraction, in: Proceedings of ACL 2020, pages 7498–7505, 2020

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Tran, T. T., Miwa, M. and Ananiadou, S., Syntactically-Informed Word Representations from Graph Neural Network (2020), in: Neurocomputing, 413(431-443)

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Trieu, H-L., Duong, K. N. A., Nguyen, N. T. H., Miwa, M., Takamura, H. and Ananiadou, S., Coreference Resolution in Full Text Articles with BERT and Syntax-based Mention Filtering, in: Proceedings of the 5th Workshop on BioNLP Open Shared Tasks, pages 196-205, 2019

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