Sætre, R.
Vorname(n): R.
Nachname(n): Sætre

Schlagworte:


Publikationen von Sætre, R. sortiert nach Titel

A

Sætre, R., Kazuhiro, Y., Miwa, M., Matsuzaki, T., Kano, Y. und Tsujii, J., AkaneRE Relation Extraction: Protein Interaction and Normalization in the BioCreAtIvE II.5 Challenge, in: BioCreative II.5 Workshop 2009 special session | Digital Annotations, Seiten 33, CNIO, 2009
[URL]
Kocbek, S., Sætre, R., Stiglic, G., Kim, J.-D., Pernek, I., Tsuruoka, Y., Kokol, P., Ananiadou, S. und Tsujii, J., Analysis of gene ranking algorithms with extraction of relevant biomedical concepts from Pubmed publications, in: Proceedings of the 1st IEEE International Conference on Computational Advances in Bio and medical Sciences (ICCABS), 2011
[URL]

B

Riedel, S., Sætre, R., Chun, H.-W., Takagi, T. und Tsujii, J., Bio-Molecular Event Extraction with Markov Logic (2011), in: Computational Intelligence, 27:4(558-582)
[DOI]
[URL]

C

Matsuoka, Y., Ghosh, S., Kikuchi, N., Sætre, R., Kemper, B., Okazaki, N., Ananiadou, S., Tsujii, J. und Kitano, H., Community Platform for Pathway Model Building, in: 10th International Conference on Systems Biology, Seiten 139-140, Stanford University, 2009
[URL]
Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. und Tsujii, J., Connecting Text Mining and Pathways using the PathText Resource, in: Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008), Seiten 1736-1740, European Language Resources Association (ELRA), 2008
attachment

D

Wang, Y., Kim, J.-D., Sætre, R., Pyysalo, S., Ohta, T. und Tsujii, J., Demystifying protein annotations: toward increasing the compatibility of different corpora, in: Proceedings of the 3rd International Symposium on Languages in Biology and Medicine (LBM 2009), Seiten 103--108, 2009
[URL]

E

Miwa, M., Miyao, Y., Sætre, R. und Tsujii, J., Entity-Focused Sentence Simplification for Relation Extraction, in: Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010), Seiten 788-796, 2010
[URL]
Miwa, M., Sætre, R., Kim, J.-D. und Tsujii, J., Event Extraction with Complex Event Classification Using Rich Features (2010), in: Journal of Bioinformatics and Computational Biology, 8:1(131--146)
[URL]
Sætre, R., Yoshida, K., Miwa, M., Matsuzaki, T., Kano, Y. und Tsujii, J., Extracting Protein-Interactions from Text with the Unified AkaneRE Event Extraction System (2010), in: Transactions on Computational Biology and Bioinformatics (TCBB), BioCreative II.5 Special Issue, 7:3(442-453)
[DOI]

F

Sætre, R., Miwa, M., Yoshida, K. und Tsujii, J., From Protein-Protein Interaction to Molecular Event Extraction, in: Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, Seiten 103--106, 2009
[URL]

I

Wang, Y., Kim, J.-D., Sætre, R., Pyysalo, S., Ohta, T. und Tsujii, J., Improving the Inter-corpora Compatibility for Protein Annotations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(901-916)
[DOI]

M


P

Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. und Tsujii, J., PathText: Text Mining Tools Integrated with Biological Pathway, in: Genomes to Systems Conference 2008 Handbook, Seiten 65, The Consortium for Post-Genome Science, 2008
Miwa, M., Sætre, R., Miyao, Y. und Tsujii, J., Protein-Protein Interaction Extraction by Leveraging Multiple Kernels and Parsers (2009), in: International Journal of Medical Informatics, 78:12(e39--e46)
[DOI]

S

Kano, Y., Nguyen, N. T. H., Sætre, R., Fukamachi, K., Yoshida, K., Miyao, Y., Tsuruoka, Y., Ananiadou, S. und Tsujii, J., Sharable type system design for tool inter-operability and combinatorial comparison, in: Proceedings of the First International Conference on Global Interoperability for Language Resources (ICGL), Seiten 122--129, 2008
Sætre, R., Sagae, K. und Tsujii, J., Syntactic features for protein-protein interaction extraction, in: Short Paper Proceedings of the 2nd International Symposium on Languages in Biology and Medicine (LBM 2007), Seiten 6.1-6.14, CEUR Workshop Proceedings (CEUR-WS.org), 2008
attachment

T

Kano, Y., Nguyen, N. T. H., Sætre, R., Yoshida, K., Fukamachi, K., Miyao, Y., Tsuruoka, Y., Ananiadou, S. und Tsujii, J., Towards Data And Goal Oriented Analysis: Tool Inter-Operability And Combinatorial Comparison, in: Proceedings of the 3rd International Joint Conference on Natural Language Processing (IJCNLP-2008), Seiten 859-864, 2008
attachment

U


W

Pyysalo, S., Sætre, R., Tsujii, J. und Salakoski, T., Why Biomedical Relation Extraction Results are Incomparable and What to do about it, in: Proceedings of the Third International Symposium on Semantic Mining in Biomedicine (SMBM 2008), Seiten 149--152, 2008
[URL]