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Trieu, H-L., Miwa, M. und Ananiadou, S., BioVAE: a pre-trained latent variable language model for biomedical text mining (2022), 38:3(872-874)

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Ananiadou, S., Thompson, P. und Nawaz, R., Mining events from the literature for bioinformatics applications (2013), in: ACM SIGWEB Newsletter, Autumn 2013

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Tsunakawa, T., Okazaki, N., Liu, X. und Tsujii, J., A Chinese-Japanese Lexical Machine Translation through a Pivot Language (2009), in: ACM Transactions on Asian Language Information Processing, 8:2(9:1--9:21)

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NenadiÄ‡, G. und Ananiadou, S., Mining Semantically Related Terms from Biomedical Literature (2006), in: ACM Transactions on Asian Language Information Processing (TALIP), 5:1(22--43)

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Mima, H., Ananiadou, S. und Matsushima, K., Terminology-Based Knowledge Mining for New Knowledge Discovery (2006), in: ACM Transactions on Asian Language Information Processing (TALIP), 5:1(74--88)

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Ananiadou, S., Thompson, P., Kano, Y., McNaught, J., Attwood, T. K., Day, P. J. R., Keane, J., Jackson, D. und Pettifer, S., Towards Interoperability of European Language Resources (2011), in: Ariadne, 67

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Lyte, V., Jones, S., Ananiadou, S. und Kerr, L., UK Institutional Repository Search: Innovation and Discovery (2009), in: Ariadne, 61

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Ananiadou, S., The National Centre for Text Mining: a Vision for the Future (2007), in: Ariadne, 53

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Ananiadou, S., Chruszcz, J., Keane, J., McNaught, J. und Watry, P., The National Centre for Text Mining: Aims and Objectives (2005), in: Ariadne, 42

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Korkontzelos, I., Piliouras, D., Dowsey, A. und Ananiadou, S., Boosting Drug Named Entity Recognition using an Aggregate Classifier (2015), in: Artificial Intelligence in Medicine (AIIM), Special issue of ICHI 2013 conference

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Nguyen, N. T. H., Gabud, R. und Ananiadou, S., COPIOUS: A gold standard corpus of named entities towards extracting species occurrence from biodiversity literature (2019), in: Biodiversity Data Journal, 7(e29626)

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Kano, Y., Baumgartner Jr., W. A, McCrochon, L., Ananiadou, S., Cohen, K. B., Hunter, L. und Tsujii, J., U-Compare: share and compare text mining tools with UIMA (2009), in: Bioinfomatics, 25:15(1997--1998)

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Trieu, H-L., Tran, T. T., Duong, K. N. A., Nguyen, A., Miwa, M. und Ananiadou, S., DeepEventMine: End-to-end Neural Nested Event Extraction from Biomedical Texts (2020), in: Bioinformatics(btaa540)

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Soto, A., Przybyɫa, P. und Ananiadou, S., Thalia: Semantic search engine for biomedical abstracts (2018), in: Bioinformatics, 35:10(1799â€“1801)

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Soto, A., Zerva, C., Batista-Navarro, R. und Ananiadou, S., LitPathExplorer: A Confidence-based Visual Text Analytics Tool for Exploring Literature-Enriched Pathway Models (2017), in: Bioinformatics, 34:8(1389-1397)

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Zerva, C., Batista-Navarro, R., Day, P. J. R. und Ananiadou, S., Using uncertainty to link and rank evidence from biomedical literature for model curation (2017), in: Bioinformatics

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Pyysalo, S. und Ananiadou, S., Anatomical Entity Mention Recognition at Literature Scale (2014), in: Bioinformatics, 30:6(868-875)

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Miwa, M., Ohta, T., Rak, R., Rowley, A., Kell, D. B., Pyysalo, S. und Ananiadou, S., A method for integrating and ranking the evidence for biochemical pathways by mining reactions from text (2013), in: Bioinformatics, 29:13(i44-i52)

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Miwa, M., Thompson, P. und Ananiadou, S., Boosting automatic event extraction from the literature using domain adaptation and coreference resolution (2012), in: Bioinformatics, 28:13(1759-1765)

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Pyysalo, S., Ohta, T., Miwa, M., Cho, H. -C., Tsujii, J. und Ananiadou, S., Event extraction across multiple levels of biological organization (2012), in: Bioinformatics, 28:18(i575-i581)

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Kocbek, S., SÃ¦tre, R., Stiglic, G., Kim, J.-D., Pernek, I., Tsuruoka, Y., Kokol, P., Ananiadou, S. und Tsujii, J., AGRA: Analysis of Gene Ranking Algorithms (2011), in: Bioinformatics, 27:8(1185-1186)

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Wang, X., McKendrick, I., Barrett, I., Dix, I., French, T., Tsujii, J. und Ananiadou, S., Automatic Extraction of Angiogenesis Bio-Process from Text (2011), in: Bioinformatics, 27:19(2730-2737)

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Tsuruoka, Y., Miwa, M., Hamamoto, K., Tsujii, J. und Ananiadou, S., Discovering and visualizing indirect associations between biomedical concepts (2011), in: Bioinformatics, 27:13(i111-i119)

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Okazaki, N., Ananiadou, S. und Tsujii, J., Building a High Quality Sense Inventory for Improved Abbreviation Disambiguation (2010), in: Bioinformatics, 26:9(1246-1253)

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BjÃ¶rne, J., Ginter, F., Pyysalo, S., Tsujii, J. und Salakoski, T., Complex event extraction at PubMed scale (2010), in: Bioinformatics, 26:12(i382-i390)

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