Publication list - NaCTeM Publications

BROWSE
EXPORT
- Export all publications
SORT BY
- Author
- Title
- Type/Journal
- Year
- Recently added
SITE
- Help
- About this site
GUEST USER
Guest
LOGIN
Name:

Password:

Deutsch, English, Nederlands, Norsk, Português, <more...>

| 1-25 | 26-50 | 51-75 | 76-100 | 101-125 | 126-150 | 151-175 | 176-200 | 201-225 | 226-250 | 251-275 | 276-300 | 301-325 | 326-350 | 351-375 | 376-400 | 401-425 | 426-450 | 451-475 | 476-500 | 501-525 | 526-550 | 551-565 |

Ohta, T., Pyysalo, S., Ananiadou, S. and Tsujii, J., Pathway Curation Support as an Information Extraction Task, in: Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011), 2011

[URL]

Thompson, P., Kano, Y., McNaught, J., Pettifer, S., Attwood, T. K., Keane, J. and Ananiadou, S., Promoting Interoperability of Resources in META-SHARE, in: Proceedings of the IJCNLP Workshop on Language Resources, Technology and Services in the Sharing Paradigm (LRTS), pages 50-58, 2011

[URL]

Stenetorp, P., Pyysalo, S. and Tsujii, J., SimSem: Fast Approximate String Matching in Relation to Semantic Category Disambiguation, in: Proceedings of the BioNLP 2011 Workshop, pages 136-145, Association for Computational Linguistics, 2011

[URL]

Korkontzelos, I., Mu, T., Restificar, A. and Ananiadou, S., Text mining for efficient search and assisted creation of clinical trials, in: Proceedings of the ACM Fourth International Workshop on Data and Text Mining in Biomedical Informatics (DTMBIO 2011), 2011

[URL]

Thompson, P., McNaught, J., Montemagni, S., Calzolari, N., del Gratta, R., Lee, V., Marchi, S., Monachini, M., Pezik, P., Quochi, V., Rupp, C. J., Sasaki, Y., Venturi, G., Rebholz-Schuhmann, D. and Ananiadou, S., The BioLexicon: a large-scale terminological resource for biomedical text mining (2011), in: BMC Bioinformatics, 12(397)

[DOI]
[URL]

Krallinger, M., Vazquez, M., Leitner, F., Salgado, D., Chatr-aryamontri, A., Winter, A., Perfetto, L., Briganti, L., Licata, L., Iannuccelli, M., Castagnoli, L., Cesareni, G., Tyers, M., Schneider, G., Rinaldi, F., Leaman, R., Gonzalez, G., Matos, S., Kim, S., Wilbur, W., Rocha, L., Shatkay, H., Tendulkar, A., Agarwal, S., Liu, F., Wang, X., Rak, R., Noto, K., Elkan, C. and Lu, Z., The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text (2011), in: BMC Bioinformatics, 12:Suppl 8(S3)

[DOI]
[URL]

Pyysalo, S., Ohta, T., Miwa, M. and Tsujii, J., Towards Exhaustive Event Extraction for Protein Modifications, in: Proceedings of the BioNLP 2011 Workshop, pages 114--123, Association for Computational Linguistics, 2011

[URL]

Ananiadou, S., Thompson, P., Kano, Y., McNaught, J., Attwood, T. K., Day, P. J. R., Keane, J., Jackson, D. and Pettifer, S., Towards Interoperability of European Language Resources (2011), in: Ariadne, 67

[URL]

Kano, Y., BjÃ¶rne, J., Ginter, F., Salakoski, T., Buyko, E., Hahn, U., Cohen, K. B., Verspoor, K., Roeder, C., Hunter, L., Kilicoglu, H., Bergler, S., Van Landeghem, S., Van Parys, T., Van de Peer, Y., Miwa, M., Ananiadou, S., Neves, M., Pascual-Montano, A., Ozgur, A., Radev, D. R., Riedel, S., SÃ¦tre, R., Chun, H.-W., Kim, J.-D., Pyysalo, S., Ohta, T. and Tsujii, J., U-Compare bio-event meta-service: compatible BioNLP event extraction services (2011), in: BMC Bioinformatics, 12(481)

[DOI]
[URL]

Kano, Y., Miwa, M., Cohen, K. B., Hunter, L., Ananiadou, S. and Tsujii, J., U-Compare: a modular NLP workflow construction and evaluation system (2011), in: IBM Journal of Research and Development, 55:3(11:1 - 11:10)

[DOI]
[URL]

Kolluru, B., Hawizy, L., Murray-Rust, P., Tsujii, J. and Ananiadou, S., Using Workflows to Explore and Optimise Named Entity Recognition for Chemistry (2011), in: PLoS ONE, 6:5(e20181)

[DOI]

Miwa, M., Pyysalo, S., Hara, T. and Tsujii, J., A Comparative Study of Syntactic Parsers for Event Extraction, in: Proceedings of BioNLP 2010, ACL., pages 37--45, 2010

[URL]

Hanaoka, H., Mima, H. and Tsujii, J., A Japanese Particle Corpus Built by Example-Based Annotation, in: Proceedings of the Seventh International Conference on Language Resources and Evaluation (LREC2010), pages 1876--1880, 2010

[URL]

Ohta, T., Pyysalo, S., Kim, J.-D. and Tsujii, J., A re-evaluation of biomedical named entity-term relations (2010), in: Journal of Bioinformatics and Computational Biology (JBCB), 8:5(917--928)

[DOI]
[URL]

Zhang, Y., Matsuzaki, T. and Tsujii, J., A Simple Approach for HPSG Supertagging Using Dependency Information, in: Proceedings of NAACL-HLT 2010, 2010

[URL]

Rupp, C. J., Thompson, P., Black, W.J., McNaught, J. and Ananiadou, S., A Specialised Verb Lexicon as the Basis of Fact Extraction in the Biomedical Domain, in: Proceedings of Interdisciplinary Workshop on Verbs: The Identification and Representation of Verb Features (Verb 2010), 2010

[URL]

Wang, X. and Ananiadou, S., A Task-Oriented Extension of the Chinese MeSH Concepts Hierarchy, in: Proceedings of the Second Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM), LREC 2010, pages 23--30, 2010

[URL]

Pyysalo, S., Ohta, T. and Tsujii, J., An Analysis of Gene/Protein Associations at PubMed Scale, in: Proceedings of the fourth International Symposium for Semantic Mining in Biomedicine (SMBM 2010), 2010

[URL]

Okazaki, N., Ananiadou, S. and Tsujii, J., Building a High Quality Sense Inventory for Improved Abbreviation Disambiguation (2010), in: Bioinformatics, 26:9(1246-1253)

[DOI]
[URL]

Yu, K., Miyao, Y., Matsuzaki, T., Wang, X., Zhang, Y., Uchimoto, K. and Tsujii, J., Comparison of Chinese Treebanks for Corpus-oriented HPSG Grammar Development (2010), in: Journal of Natural Language Processing (Special Issue on Empirical Methods for Asian Language Processing)

BjÃ¶rne, J., Ginter, F., Pyysalo, S., Tsujii, J. and Salakoski, T., Complex event extraction at PubMed scale (2010), in: Bioinformatics, 26:12(i382-i390)

[DOI]
[URL]

Taura, K., Matsuzaki, T., Miwa, M., Kamoshida, Y., Yokoyama, D., Dun, N., Shibata, T., Jun, C. S. and Tsujii, J., Design and Implementation of GXP Make -- A Workflow System Based on Make, in: Proceedings of the 2010 IEEE Sixth International Conference on e-Science, pages 214--221, IEEE Computer Society, 2010

[DOI]

Wang, X., Tsujii, J. and Ananiadou, S., Disambiguating the Species of Biomedical Named Entities Using Natural Language Parsers (2010), in: Bioinformatics, 26:5(661--667)

[DOI]
[URL]

Miwa, M., Miyao, Y., SÃ¦tre, R. and Tsujii, J., Entity-Focused Sentence Simplification for Relation Extraction, in: Proceedings of the 23rd International Conference on Computational Linguistics (COLING 2010), pages 788-796, 2010

[URL]

Nawaz, R., Thompson, P. and Ananiadou, S., Evaluating a meta-knowledge annotation scheme for bio-events, in: Proceedings of the Workshop on Negation and Speculation in Natural Language Processing, pages 69--77, 2010

[URL]

processing time: 0.3772 seconds.