UMLS:C0847097 - FACTA Search

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Query: UMLS:C0847097 (acidity)
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Michael additions of malonodinitrile as well as several other reagents to chalcone have been found to proceed well in pure ionic liquids, without the addition of any catalyst. The catalytic effect of the residual acidity caused by hydrolysis of ionic liquids anions was excluded because HCl in dichloromethane did not catalyse the Michael addition of malonodinitrile. Piperidine was tested as the catalyst and was found to be a much better catalyst in ionic liquids than in dichloromethane. Therefore, the following question arose: what is the effect of ionic liquids on the dissociation constants of C--H acids?
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PMID:Michael additions of methylene active compounds to chalcone in ionic liquids without any catalyst: the peculiar properties of ionic liquids. 1709 17

The hydrogen-bond (HB) interactions of the monocharged active forms of nicotine and acetylcholine (ACh) have been compared theoretically by using density functional theory (DFT) calculations and experimentally on the basis of crystallographic observations and the measurement of equilibrium constants in solution. The 2,4,6-trinitrophenolate (picrate) counterion was used to determine the experimental HB basicity of the cations despite its potential multisite HB acceptor properties. The preferred HB interaction site of the ammonium picrate salts was determined from a survey of crystallographic data found in the Cambridge Structural Database (CSD) and is supported by theoretical calculations. Two distinct classes of ammonium groups were characterised depending on the absence (quaternary ammonium) or presence (tertiary, secondary and primary ammoniums) of an N(+)HO hydrogen bond linking the two ions. The crystal structure of nicotinium picrate was determined and compared with that of ACh. This analysis revealed the peculiar behaviour of the ammonium moiety of nicotinic acetylcholine receptor (nAChR) ligands towards the picrate anion. Dedicated methods have been developed to separate the individual contributions of the anion and cation accepting sites to the overall HB basicity of the ion pairs measured in solution. The HB basicities of the picrate anions associated with the two different ammonium classes were determined in dichloromethane solution by using several model ion pairs with non-basic ammonium cations. The experimental and theoretical studies performed on the nicotine and ACh cations consistently show the significant HB ability of the acceptor site of nAChR agonists in their charged form. Both the greater HB basicity of the pyridinic nitrogen over the carbonyl oxygen and the greater HB acidity of the N(+)H unit relative to N(+)CH could contribute to the higher affinity for nAChRs of nicotine-like ligands relative to ACh-like ligands.
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PMID:Hydrogen-bond interactions of nicotine and acetylcholine salts: a combined crystallographic, spectroscopic, thermodynamic and theoretical study. 1710 66

The kinetics of the coupling of indole (1a), N-methylindole (1b), 5-methoxyindole (1c), and 5-cyanoindole (1d) with a set of reference benzhydryl cations have been investigated in acetonitrile and/or dichloromethane. The second-order rate constants for the reactions correlate linearly with the electrophilicity parameter E of the benzhydryl cations. This allows the determination of the reactivity parameters, N and s, characterizing the nucleophilicity of 1a-d according to the linear free enthalpy relationship log k(20 degrees C) = s(N + E) (Acc. Chem. Res. 2003, 36, 66). The nucleophilicity parameters thus defined describe nicely the reactions of 1a-d with 4,6-dinitrobenzofuroxan (2), a neutral superelectrophilic heteroaromatic whose electrophilicity (E) has been recently determined. On this ground, the kinetics of the coupling of 2 with a large variety of indole structures have been studied in acetonitrile, leading to a ranking of this family of pi-excessive carbon nucleophiles over a large domain of the nucleophilicity scale N. Importantly, two linear and parallel correlations are obtained on plotting the measured N values versus the pK(a)(H(2)O) values for protonation at C-3 of 5-X-substituted indoles and 5-X-substituted 2-methylindoles, respectively. This splitting reveals that the presence of the 2-methyl group causes steric hindrance to the approach of 2 from the adjacent C-3 position of an indole structure. The N vs pK(a)(H(2)O) correlation for 5-X-substituted indoles is used for a rapid determination of the C-3 basicity of indoles whose acidity constants cannot be measured through equilibrium studies in strongly acidic aqueous media.
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PMID:Nucleophilic reactivities of indoles. 1710 34

A series of iron(III) complexes of the type [Fe(L)Cl3], where L is the variously N-alkyl-substituted bis(pyrid-2-ylmethyl)amine ligand such as bis(pyrid-2-ylmethyl)amine (L1), N,N-bis(pyrid-2-ylmethyl)methylamine (L2), N,N-bis(pyrid-2-ylmethyl)-n-propylamine (L3), N,N-bis(pyrid-2-ylmethyl)-iso-butylamine (L4), N,N-bis(pyrid-2-ylmethyl)-iso-propylamine (L5), N,N-bis(pyrid-2-ylmethyl)cyclohexylamine (L6), and N,N-bis(pyrid-2-ylmethyl)-tert-butylamine (L7), have been isolated and characterized by elemental analysis and spectral and electrochemical methods. The crystal structures of the complexes [Fe(L2)Cl3] 2, [Fe(L3)Cl3] 3, and the complex-substrate adduct [Fe(L5)(TCC)(NO3)] 5a, where TCC2- is the tetrachlorocatecholate dianion, have been determined by single-crystal X-ray crystallography. The complexes [Fe(L2)Cl3] 2 and [Fe(L3)Cl3] 3 possess a distorted octahedral geometry, in which the linear tridentate 3N ligands are cis-facially coordinated to the iron(III) center, and three chloride ions occupy the remaining coordination sites. The replacement of the N-methyl group in 2 by N-n-propyl group as in 3 leads to the formation of the Fe-Npy bonds and also the Fe-Cl bonds located trans to them of different lengths. The catecholate adduct 5a also possesses a distorted octahedral geometry, in which the ligand is cis-facially coordinated to iron(III) center, TCC2- is asymmetrically chelated trans to the two pyridyl moieties of the ligand, and one of the oxygen atoms of the nitrate ion occupies the sixth coordination site. All of the present complexes have been interacted with simple and substituted catechols. The catecholate adducts [Fe(L)(DBC)Cl] and [Fe(L)(DBC)(Sol)]+, where H2DBC is 3,5-di-tert-butylcatechol and Sol=H2O/CH3CN, have been generated in situ, and their spectral and redox properties and dioxygenase activities have been studied in dimethylformamide and dichloromethane solutions. All of the complexes catalyze the cleavage of H2DBC using molecular oxygen to afford both intra- and extradiol cleavage products. The formation of extradiol cleavage products is facilitated by cis-facial coordination of the 3N ligands and availability of vacant coordination site on iron(III) center for dioxygen binding. It is remarkable that the nature of the N-alkyl substituent in 3N ligands controls the regioselectivity of cleavage, with the n-propyl, iso-butyl, iso-propyl, and cyclohexyl groups enhancing the yield of extradiol products (46-68%) in dichloromethane. The rate of oxygenation depends upon the solvent and the Lewis acidity of iron(III) center as modified by the sterically demanding N-alkyl groups-length and degree of substitution. The plot of log (kO2) versus energy of the low-energy DBC2--to-iron(III) LMCT band is linear, demonstrating the importance of the Lewis acidity of the iron(III) center in dictating the rate of the dioxygenase reaction.
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PMID:Iron(III) complexes of tridentate 3N ligands as functional models for catechol dioxygenases: the role of ligand N-alkyl substitution and solvent on reaction rate and product selectivity. 1795 55

The room-temperature stable CI3+ salts [CI3+[pftb](-)1 and [CI3]+[al-f-al](-) 2([pftb](-) = [Al(OC(CF3)3)4](-); [al-f-al](-) = [((CF3)3CO)3Al-F-Al(OC(CF3)3)3](-)) were prepared in quantitative yields from purified CI4 and the corresponding silver aluminates with total exclusion of light (NMR, IR, UV-VIS, X-ray diffraction). The isolated CI(3)(+) cation is trigonal planar with a sum of <(I-C-I) = 360.0 degrees (1) and 359.9 degrees (2). Attempts to prepare CHI2+ and CH2I+ salts from CHI3 or CH2I2/Ag[pftb] mixtures remained unsuccessful; the reaction with CH2I2 leads to the formation of the adduct [Ag(CH2I2)3]+[pftb](-)3, while for HCI3, dismutation with formation of 1 as well as 3 was observed. All particles were also calculated at the MP2/TZVPP level to predict the vibrational and electronic spectra as well as to calculate the Gibbs free energies of all reactions (DeltaG degrees , gas phase and CH2Cl2 solution). Quantum chemical calculations were also used to investigate the stability of the [pftb](-) anion against the electrophilic attack of the CX3+ and CHnX3-n+ cations (X = F-I, n = 1-3). The strength of the Lewis acidity of these cations and of the isoelectronic boron halides BX()and BHnX3-n have been established on the basis of their fluoride ion affinities (FIAs). The FIAs of the carbon and the boron containing compounds show opposite trends, with fluorinated halomethyl cations being stronger acids than their heavier congeners but iodinated holoboranes being stronger acids than their lighter homologues.
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PMID:Stable CI3+ salts and attempts to prepare CHI2+ and CH2I+. 1825 29

A fungal endophyte identified as Fusarium sp. Tlau3 was isolated from fresh twig of Thunbergia laurifolia Lindl., a Thai medicinal plant collected from the forest of Chiang Mai Province, Northern Thailand. The fungus was grown on a medium containing yeast extracts and sucrose. The fungal metabolites were isolated from the culture broth by dichloromethane extraction, isooctane/methanol then n-butanol/water partitions, and fractionation with Sephadex LH 20 column chromatography. Acanthamoebicidal fractions were found to induce the formation of large contractile vacuole (LCV) in trophozoites of an Acanthamoeba clinical isolate, leading to cell lysis under isotonic and hypotonic conditions within 1 h. In hypertonic condition, LCV formation was also induced but without cell lysis. Acridine orange staining of the treated cells revealed increased intracellular acidity, implying an increased proton pumping or a vacuolar proton-ATPase (V-ATPase) stimulation. Scanning electron microscopy showed cell membrane damage with intact cytoplasmic organelles. Our finding has indicated that contractile vacuoles of Acanthamoeba trophozoites are the primary target of the amoebicidal substance(s) from this endophytic fungus.
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PMID:Acanthamoebicidal activity of Fusarium sp. Tlau3, an endophytic fungus from Thunbergia laurifolia Lindl. 1863 46

A novel electrochemical sensor for the detection of parathion based on molecularly imprinted polymer of self-assembled o-aminothiophenol onto gold electrode was constructed. The polymerization solution was prepared from a 10 mmol/L parathion, 5 mmol/L tetra-n-butylammonium perchlorate, 30 mmol/L o-aminothiophenol solution of dichloromethane. Electropolymerization was carried out over 30 cycles between -0.3 V and 1.4 V. The template molecules were removed from the modified electrode surface by washing with 0.5 mol/L hydrochloric acid. Cyclic voltammetry was employed in the process of electrochemical measurements. The experimental results show that the optimum acidity of background solution is pH 6.8 and the optimum incubation time is 10 min. A highly linear response to parathion in the concentration range of 1.0 x 10(-4)--5.0 x 10(-7) mol/L is observed, with a detection limit of 2.0 x 10(-7) mol/L estimated at a signal-to-noise ratio of 3. The sensor has been applied to the analysis of parathion in real sample with recovery rates ranging from 98.0% to 104%. Parathion imprinted and nonimprinted polymer films were exposed to a series of closely related compounds, e.g. methyl-parathion, paraoxon, phoxim, omethoate, nitrobenzene and o-, m-, p- nitrophenol, and the sensor exhibited good selectivity and sensitivity to parathion.
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PMID:[Preparation and characterization of parathion sensor based on molecularly imprinted polymer]. 1863 64

A series of 1 : 1 iron(III) complexes of sterically hindered and systematically modified tridentate 3N donor ligands have been isolated and studied as functional models for extradiol-cleaving catechol dioxygenases. All of them are of the type [Fe(L)Cl(3)], where L is N-methyl-N'-(pyrid-2-ylmethyl)ethylenediamine (L1), N-ethyl-N'-(pyrid-2-ylmethyl)ethylenediamine (L2), N-benzyl-N'-(pyrid-2-ylmethyl)ethylenediamine (L3), N,N-dimethyl-N'-(pyrid-2-ylmethyl)ethylenediamine (L4), N'-methyl-N'-(pyrid-2-ylmethyl)-N,N-dimethylethylenediamine (L5), N'-ethyl-N'-(pyrid-2-ylmethyl)-N,N-dimethylethylenediamine (L6) and N'-benzyl-N'-(pyrid-2-ylmethyl)-N,N-dimethylethylenediamine (L7). They have been characterized by elemental analysis and spectral and electrochemical methods. The X-ray crystal structures of the complexes [Fe(L2)Cl(3)] 2, [Fe(L3)Cl(3)] 3 and [Fe(L7)Cl(3)] 7 have been successfully determined. All the three complexes possess a distorted octahedral coordination geometry in which the ligand is facially coordinated to iron(III) and the chloride ions occupy the remaining coordination sites. Upon replacing the N-ethyl group on the terminal nitrogen donor in 2 by the bulky N-benzyl group as in 3, the terminal Fe-N bond distance increases slightly from 2.229(5) A to 2.244(5) A. Upon incorporating the sterically demanding N-benzyl group on the central nitrogen donor in 4 to obtain 7, the central Fe-N(amine) bond distance increases from 2.181(5) A to 2.299(2) A. The catecholate adducts [Fe(L)(DBC)(Cl)] and [Fe(L)(DBC)(Sol)](+), where H(2)DBC is 3,5-di-tert-butylcatechol and Sol = solvent (H(2)O/DMF), have been generated in situ and their spectral and redox properties and dioxygenase activities have been studied in N,N-dimethylformamide and dichloromethane solutions. The adducts [Fe(L)(DBC)(Sol)](+) undergo cleavage of DBC(2-) in the presence of molecular oxygen to afford both intra- and extradiol cleavage products. The extradiol products are higher in dichloromethane than in DMF solution and the extradiol to intradiol product selectivity (E/I, 7.2 : 1-18.5 : 1) observed decreases upon increasing the steric bulk of N-alkyl substituent on the terminal nitrogen atom and upon incorporating an N-alkyl substituent on the central nitrogen atom. The plot of log(k(O(2))) vs. energy of the low energy catecholate-iron(III) LMCT band is linear, which is consistent with the proposal that the LMCT band energy corresponds to the energy needed for a spin-inversion process at the iron center upon dioxygen attack. Also, the rate of oxygenation is dictated by the solvent as well as the Lewis acidity of the iron(III) center, as shown by the linear plot of log(k(O(2))) vs.E(1/2) of the Fe(III)/Fe(II) redox potentials of the [Fe(L)(Sol)(3)](3+) complexes.
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PMID:Synthesis, structure, spectra and reactivity of iron(III) complexes of facially coordinating and sterically hindering 3N ligands as models for catechol dioxygenases. 1905 Jul 88

The kinetics and mechanism of the deprotection (detritylation) of 5'-O-(4,4'-dimethoxytrityl)-2'-deoxythymidine nucleoside catalysed by dichloroacetic acid to give a 4,4'-dimethoxytrityl carbocation have been studied in toluene, dichloromethane and acetonitrile. There is little or no effect of solvent polarity on the equilibrium and rate constants. Entropies of activation are highly negative approximately -105 J K(-1) mol(-1) and similarly show little variation with solvent. Addition of small amounts of water to the reaction medium reduces the detritylation rate, presumably through its effect on the solution acidity. All observations are compatible with detritylation occurring through a concerted general acid-catalysed mechanism rather than a stepwise A1 process.
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PMID:The kinetics and mechanism of the acid-catalysed detritylation of nucleotides in non-aqueous solution. 1908 45

A water-dichloromethane interface is used for synthesis and assembly of rutile TiO(2) nanorods. By hydrothermal treatment of a dichloromethane solution of TiCl(4) at the interface of water-dichloromethane, turning to no surfactant or template, hierarchical rutile TiO(2) superstructures are developed. By tuning the molar ratio of reactants r(w) (H(2)O/TiCl(4)), the size and shape of the samples significantly change. At a low value of r(w), highly extended, robust, porous, and thick titania film with ordered rutile nanorod bundles are deposited at the interface. At a high value of r(w), powders consisting of hierarchical rutile nanorod spheres together with disordered nanorods are obtained. A rational formation mechanism is proposed on the basis of a range of experiments. The main factors influencing the morphologies of the samples may be attributed to the acidity of the reaction system and the adsorption ability of the precursor nanoparticles to the water-dichloromethane interface. The as-obtained rutile TiO(2) hierarchical superstructures show higher photocatalytic property to decompose methylene blue (MB) dye compared with that of commercial P25, which can be ascribed to the contribution of high surface area and high crystallinity. Other applications, such as solar energy conversion, environmental remediation, and advanced optical/electric nanodevices may also benefit from the unique properties of the hierarchically rutile TiO(2) superstructures.
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PMID:Water-dichloromethane interface controlled synthesis of hierarchical rutile TiO2 superstructures and their photocatalytic properties. 1912 97

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