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Query: UMLS:C0847097 (acidity)
 15,165 document(s) hit in 31,850,051 MEDLINE articles (0.00 seconds)

The amplification of low-density lipoprotein (LDL) peroxidation in vitro by copper and myoglobin are well-studied biochemical approaches for investigating the oxidative modification of LDL and its role in the pathogenesis of atherosclerosis. Since the acidity of the environment is increased in inflammatory sites, the aim of this study was to investigate the effects of acidic pH on the oxidisability of LDL mediated by the haem protein myoglobin in comparison with that of copper-mediated LDL oxidation. The results show that acidic pH enhances myoglobin-mediated LDL oxidation as measured by conjugated dienes, lipid hydroperoxides and electrophoretic mobility, whilst a retardation is observed with copper as pro-oxidant; the mechanism probably relates to the effects of pH on the decomposition and formation of lipid hydroperoxides and the relative influences of copper ions and of myoglobin under these conditions.
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PMID:The effects of pH on the oxidation of low-density lipoprotein by copper and metmyoglobin are different. 910 82

Recently great interest has arisen in the synthesis of combinatorial libraries, and this technology provides a significant partner to contemporary strategies in rational design and lead discovery. By simple combination of a given set of building blocks, high numbers of different molecules are produced simultaneously, increasing the possibility of discovery of a lead compound in a limited time. One direction of research in this field focuses on the synthesis of libraries composed of modified amino acids. Here, the synthesis and characteristics of some building blocks derived from ornithine are described. The synthesis is based on the acylation/sulfonation of the copper complex of ornithine by aroyl and arylsulfonyl chlorides exemplified by 2-thiophenecarbonyl chloride, p-toluenesulfonyl chloride and 8-quinolinesulfonyl chloride. To evaluate the potential use of these modified alpha-amino acids as component in an oligopeptide library, all three derivatives were incorporated in a hexapeptide with a random sequence using a standard coupling procedure (DIC/HOBt/DIEA). Depending upon the acidity of the amido hydrogen on the delta-nitrogen, competition between intramolecular cyclization and peptide bond formation was observed. The higher the acidity, the more pronounced is this side reaction. Coupling conditions for peptide formation were optimized so that the newly described amino acid based building blocks are suitable for incorporation into libraries consisting of unnatural amino acids. The outlined procedures open up a broad avenue of possibilities for creation of diversity into peptidic libraries.
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PMID:alpha-Amino acids derived from ornithine as building blocks for peptide synthesis. 914 14

Photodissociation of fully reduced, carbonmonoxy cytochrome bo3 causes ultrafast transfer of carbon monoxide (C triple bond O) from heme iron to CuB in the binuclear site. At low temperatures, the C triple bond O remains bound to CuB for extended times. Here, we show that the binding of C triple bond O to CuB perturbs the IR stretch of an un-ionized carboxylic acid residue, which is identified as Glu286 by mutation to Asp or to Cys. Before photodissociation, the carbonyl (C=O)-stretching frequency of this carboxylic acid residue is 1726 cm-1 for Glu286 and 1759 cm-1 for Glu286Asp. These frequencies are definitive evidence for un-ionized R-COOH and suggest that the carboxylic acids are hydrogen-bonded, though more extensively in Glu286. In Glu286Cys, this IR feature is lost altogether. We ascribe the frequency shifts in the C=O IR absorptions to the effects of binding photodissociated C triple bond O to CuB, which are relay ed to the 286 locus. Conversely, the 2065 cm-1 C triple bond O stretch of CuB-CO is markedly affected by both mutations. These effects are ascribed to changes in the Lewis acidity of CuB, or to displacement of a CuB histidine ligand by C triple bond O. C triple bond O binding to CuB also induces a downshift of an IR band which can be attributed to an aromatic C-H stretch, possibly of histidine imidazole, at about 3140 cm-1. The results suggest an easily polarizable, through-bond connectivity between one of the histidine CuB ligands and the carboxylic group of Glu286. A chain of bound water molecules may provide such a connection, which is of interest in the context of the proton pump mechanism of the heme-copper oxidases.
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PMID:Fourier transform infrared evidence for connectivity between CuB and glutamic acid 286 in cytochrome bo3 from Escherichia coli. 934 Dec 7

Integration and comparison of metal contamination from acid mine drainage and an assessment of the potential for ecological impact was conducted in the aquatic ecosystems of the Le An river. The results indicated low acidity, high levels of suspended solids containing a high content of copper in river water and sediment in the upstream region of the Le An river due to the pollution from the Dexing copper mine, and high concentrations of zinc and copper in surface water and sediments, high release potential and ready bioavailability of heavy metals in sediments downstream (after site A07) due to the pollution from the Jishui river. The pollution from acid mine drainage in the Le An river potentially effects an ecological impact on the aquatic ecosystem, mainly between sites A04 and A08. The management strategy should, therefore be mainly applied to acid mine drainage from the Dexing copper mine and heavy metal discharges from the Jishui river.
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PMID:Spatial and temporal patterns of acidity and heavy metals in predicting the potential for ecological impact on the Le An river polluted by acid mine drainage. 937 91

Interactions of two bile acids (cholic and glycocholic acids) with asparagine have been studied by potentiometry in aqueous solutions under conditions similar to those observed in biological fluids (37 degrees C and I = 0.15 M NaCl), and in the absence and presence of copper(II). To characterize the equilibria for the systems copper(II)/bile acid/asparagine, specifically to assess cooperative binding between bile acids and asparagine, the acidity constant of asparagine and formation constants for copper(II)/bile acid and copper(II)/asparagine were also obtained under the same conditions. The results obtained suggest cooperativity in the binding of bile acid to asparagine in the presence of copper(II).
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PMID:Copper(II) increases bile acid binding to asparagine. 953 88

Disadvantages of the some zwitterionic pH buffers are (i) that they can interact with metal ions as well as protons, and (ii) that they may have a surfactant effect in chemical or in vitro biological or biochemical studies. This has to be taken into account when a buffer is selected. Here, the copper-complexing capacity and the surfactant activity of three compounds, 3-[N,N-bis (2-hydroxyethyl)amino]-2-hydroxypropanesulfonic acid (DIPSO), N-(2-hydroxyethyl)piperazine-N'-(2-hydroxypropanesulfonic acid) (HEPPSO), and piperazine-N,N'-bis(2-ethanesulfonic acid) (Pipes), were investigated. Global stability constants (log betaabc) of copper(II)-buffer complexes were determined, at 25 degrees C, 0.5 M ionic strength, and at 0.8 mM buffer concentration, by pH and pCu ion-selective electrode measurements. Here, betaabc corresponds to the equilibrium: aCu2+ + bL- + cH+ left and right arrow (CuaLbHc)(2a-b+c); HL = DIPSO or HEPPSO; c: +1 = proton; -1 = hydroxide. Using SUPERQUAD constants were calculated, giving: DIPSO: log beta110 = 5.02, log beta120 = 8.99, log beta130 = 13.0, log beta140 = 16.3, log beta14-1 = 9.26, log beta14-2 = 0.645, log beta150 = 20.5, log beta160 = 24.3, log beta16-1 = 16.1, log beta16-2 = 8.98; HEPPSO: log beta110 = 4.29, log beta120 = 8.35, log beta130 = 12.1, log beta140 = 15.9, log beta150 = 19.6, log beta160 = 23.4, log beta16-1 = 14.9. The pKa values were determined at higher buffer concentrations, giving a value 7.33 for DIPSO and 7.84 for HEPPSO at 2.0 mM buffer concentration. Effects of buffer concentration on stability and acidity constants were investigated and compared with measurements using voltammetric and potentiometric stripping analysis, confirming no copper(II) complexation by Pipes. Surfactant activities were determined using alternating current polarography, confirming marked surface activity of 10 mM of DIPSO or HEPPSO.
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PMID:Copper(II) complexation properties and surfactant activity of 3-[N, N-bis(2-hydroxyethyl)amino]-2-hydroxypropanesulfonic acid and N-(2-Hydroxyethyl)piperazine-N'-2-hydroxypropanesulfonic acid pH buffers which may affect trace metal speciation in in vitro studies. 988 92

/ In Yellowstone National Park, tailings and associated trace metals from past mining have been deposited along 28 km of Soda Butte Creek by large flood events. This study documents grass species diversity, density, and biomass; trace metal concentrations in soils; and soil pH, salinity, and clay content in four selected floodplain meadows contaminated by these tailings. Trace metal levels frequently exceed acceptable concentrations for agricultural soils at sampling points within the meadows. pH levels within flood-deposited tailings are strongly to moderately acid, while pH levels outside of tailings deposits are neutral. The data analysis: (1) shows that metals and acidity associated with tailings affect plant biomass, density, and diversity; (2) documents that the vegetation/metal and vegetation/pH associations are more of a threshold than a linear relationship; and (3) suggests that other factors may be involved in structuring the community. Vegetation diversity, density, and biomass decrease at threshold levels of trace metal concentrations and soil pH in all four meadows. CuSum plots of diversity in relation to trace metal levels show a decrease in mean diversity at 315 ppm copper, 22 ppm arsenic, 4.2% iron, 65 ppm lead, and 170 ppm zinc. Densities of Phleum pratense and Poa pratensis were significantly lower (P </= 0.001) on plots with more than 250 ppm copper. Above-ground biomass of Phleum pratense was also significantly lower on plots with copper levels above 250 ppm. Decreased mean grass density was found on plots with pH < 6.4, but the only statistically significant difference was for Juncus balticus, which had increased density on plots with pH < 6.4. In contrast to the clear impacts of trace metals and pH on vegetation, other site characteristics did not alter measured vegetation characteristics.
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PMID:Persistent Impacts of Trace Metals from Mining on Floodplain Grass Communities Along Soda Butte Creek, Yellowstone National Park. 1062 12

It was established in the experiments determining the influence of the mushroom powder on acidity of the HCl solution by means of ionometrical method that in 15 minutes after introduction 3 gram of the powder pH of the solution increases from 1.62 up to 2.64. The stable meaning of the solution pH (without fall) can be (held) the same in the presence of the powder more than 23 hours. The mushroom powder reduces the high content of the ions Pb2+ and Cu2+ in the solution from 8.8 x 10(-6) up to 3.3 x 10(-6) and from 11.8 x 10(-6) up to 8.6 x 10(-6) mole/ml correspondingly. The trustworthy reduction (fall) of the concentration of the ions Zn2+ and Cd2+ in the filtrate was not discovered (found out). To determine the content of metal in the solution the method of flaming atomic adsorption.
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PMID:[Antacid and sorption properties of mushroom powder made of dried solids (Pleurotus ostreatus)]. 1064 Dec 77

A simple and highly selective flow injection on-line pre-concentration and separation-flame atomic absorption spectrometric method was developed for routine analysis of trace amounts of lead in biological and environmental samples. The selective preconcentration of lead was achieved in a wide range of sample acidity (0.075 to > or = 3 mol L(-1)HNO3) on a microcolumn (145 microL) packed with a macrocycle immobilized on silica gel. The lead retained on the column was effectively eluted with an EDTA solution (0.03 mol L(-1), pH 10.5). Three kinds of potential interferences, i.e., preconcentration inferences from metal ions with an ionic radius similar to that of Pb(II) due to their competition for the cavity of the macrocyle, elution kinetic interferences from ions which form stable complexes with EDTA due to their competition for EDTA, and interferences in the atomizer from residual matrix, were evaluated and compared in view of the read-out mode of the analyte response (peak area vs peak height), column wash step (with vs without), column capacity (50 vs 145 microL), and column shape (conical vs cylindrical). The results showed that a combination of increase in column capacity, quantitation based on peak area, and use of dilute nitric acid for column wash before elution efficiently avoid the above-mentioned potential interferences. With the use of a 145 microL column the present system tolerated up to 0.1 g L(-1) Ba(II), 1 g L(-1) Sr(II), and at least 10 g L(-1) Fe(III), Cu(II), Ni(II), Zn(II), Cd(II), Al(III), K(I), Na(I), CaII), and Mg(II) in the sample digest. Further improvement of the interference tolerance can be achieved by increasing column capacity if more complicated samples need to be analyzed. At a sample loading rate of 3.9 mL min(-1) with 30-s preconcentration, an enrichment factor of 52, a detection limit (3s) of 5 micrograms L(-1) Pb in the digest and a sampling frequency of 63 h(-1) were obtained. The precision (RSD, n = 11) at the 200 micrograms L(-1) level was 1.9%. The enrichment factor and the detection limit can be further improved by increasing sample loading rate without degradation in the efficiency due to the favorable kinetics and low hydrodynamic impedance of the present system. The analytical results obtained by the proposed method for a number of biological and environmental standard reference materials were in good agreement with the certified and recommended values.
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PMID:Application of a macrocycle immobilized silica gel sorbent to flow injection on-line microcolumn preconcentration and separation coupled with flame atomic absorption spectrometry for interference-free determination of trace lead in biological and environmental samples. 1066 Apr 37

A rapid and simple procedure was developed for the determination of copper, iron, manganese, and zinc in animal feeds using an identical flow injection spectrophotometric manifold but different chromogenic reagents and different detection wavelengths. Bis(cyclohexanone)oxalydihydrazone, formaldoxime, 1,10-phenanthroline, and xylenol orange were adopted as chromogenic reagents for Cu, Mn, Fe, and Zn, respectively. Detection conditions such as manifold parameters, buffer pH, reagent concentration, temperature, and acidity of sample solution were optimized. Analytical characteristics of the method and interference of metal ions commonly present in feeds were studied. By changing the reagents and detection wavelengths, which can be done quickly, the proposed low cost flow injection system can determine Cu, Fe, Mn, or Zn in the range of 0.5-10 mg/L with a sampling throughput of 120/h.
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PMID:Flow injection spectrophotometric determination of copper, iron, manganese, and zinc in animal feeds using a common manifold. 1112 29


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