Gene/Protein Disease Symptom Drug Enzyme Compound
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Query: UMLS:C0847097 (acidity)
 15,165 document(s) hit in 31,850,051 MEDLINE articles (0.00 seconds)

Arginine forms a stable noncovalent anionic salt bridge complex with DP (a crown ether which contains two endocyclic dialkylhydrogenphosphate esters). Abundant adduct formation with DP is observed for complexes with arginine, YAKR, HPPGFSPFR, AAKRKAA, RR, RPPGFSPFR, RYLGYL, RGDS, and YGGFMRGL in electrospray ionization mass spectrometry (ESI-MS) experiments. DFT calculations predict a hydrogen bonded salt bridge structure with a protonated guanidinium flanked by two deprotonated phosphates to be the lowest energy structure. Dissociation of DP/peptide adducts reveals that, in general, the relative gas phase acidity of a peptide is dependent on peptide length, with longer peptides being more acidic. In particular, peptides that are six residues or more in length can stabilize the deprotonated C-terminus by extensive hydrogen bonding with the peptide backbone. Dissociation of DP/peptide complexes often yields the deprotonated peptide, allowing for the facile formation of anionic peptides that otherwise would be difficult to generate in high abundance. Although DP has a preference for binding to arginine residues in peptides, DP is also observed to form less abundant complexes with peptides containing multiple lysines. Lys-Xxx-Lys and Lys-Lys sequences form low abundance anionic adducts with DP. For example, KKKK exclusively forms a double adduct with one net negative charge on the complex.
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PMID:Selective molecular recognition of arginine by anionic salt bridge formation with bis-phosphate crown ethers: implications for gas phase peptide acidity from adduct dissociation. 1504 66

Five factors contribute to episodic depressions in pH and ANC during hydrologic events in low-order streams in Maine: (1) increases of up to 50 microeq litre(-1) NO3; (2) increases of up to 75 microeq litre(-1) organic acidity; (3) increases of as much as 0.3 in the anion fraction of SO4; (4) as much as 100 microeq litre(-1) acidity generated by the salt-effect in soils; and (5) typically < or = 40% dilution by increased discharge. In conjunction with increased discharge, factors 1, 2 or 4 appear necessary to depress pH to less than 5.0. The chemistry of individual precipitation events is irrelevant to the generation of acidic episodes, except those caused by high loading of neutral salts in coastal regions. Increases in discharge, but not necessarily in dilution of solutes, in combination with the chronically high SO4 from atmospheric deposition, provide the antecedent chemical conditions for episodic acidification. Differences in antecedent moisture conditions determine the processes that control output of either ANC or acidifying agents to aquatic systems.
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PMID:Mechanisms of episodic acidification in low-order streams in Maine, USA. 1509 25

The ionic compositions of particulate matter with aerodynamic diameter < or = 2.5 microm (PM2.5) and size-resolved aerosol particles were measured in Big Bend National Park, Texas, during the 1999 Big Bend Regional Aerosol and Visibility Observational study. The ionic composition of PM2.5 aerosol was dominated by sulfate (SO4(2-)) and ammonium (NH4+). Daily average SO4(2-) and NH4+ concentrations were strongly correlated (R2 = 0.94). The molar ratio of NH4+ to SO4(2-) averaged 1.54, consistent with concurrent measurements of aerosol acidity. The aerosol was observed to be comprised of a submicron fine mode consisting primarily of ammoniated SO4(2-) and a coarse particle mode containing nitrate (NO3-). The NO3- appears to be primarily associated with sea salt particles where chloride has been replaced by NO3-, although formation of calcium nitrate (Ca(NO3)2) is important, too, on several days. Size-resolved aerosol composition results reveal that a size cut in particulate matter with aerodynamic diameter < or = 1 microm would have provided a much better separation of fine and coarse aerosol modes than the standard PM2.5 size cut utilized for the study. Although considerable nitric acid exists in the gas phase at Big Bend, the aerosol is sufficiently acidic and temperatures sufficiently high that even significant future reductions in PM2.5 SO4(2-) are unlikely to be offset by formation of particulate ammonium nitrate in summer or fall.
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PMID:Aerosol ion characteristics during the Big Bend Regional Aerosol and Visibility Observational study. 1514 45

New chiral hydroxyethers 1a-f were prepared for asymmetric protonation of achiral enolates prepared from prochiral ketones. The enantioselectivity of protonation was highly dependent upon the acidity of the chiral alcohols, the highest enantioselectivity (90% ee) being achieved with 3,5-dichloro-substituted beta-hydroxyether 1c. A salt-free enolate generated from trimethylsilyl enol ether 4 provided product of the highest ee. Unlike other reagents, chloro-substituted alcohols provided almost consistent enantioselections throughout the reaction temperatures examined (-25 to -98 degrees C). Protonation of other aromatic ketones showed selectivity similar to that of 2-methyl-1-tetralone.
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PMID:Asymmetric protonation of ketone enolates using chiral beta-hydroxyethers: acidity-tuned enantioselectivity. 1525 44

Although the crystallographic structure of the bacterial porin OmpF has been known for a decade, the physical mechanisms of its ionic selectivity are still under investigation. We address this issue in a series of experiments with varied pH, salt concentrations, inverted salt gradient, and charged and uncharged lipids. Measuring reversal potential, we show that OmpF selectivity (traditionally regarded as slightly cationic) depends strongly on pH and salt concentration and is conditionally asymmetric, that is, the calculated selectivity is sensitive to the direction of salt concentration gradient. At neutral pH and subdecimolar salt concentrations the channel exhibits nearly ideal cation selectivity (t(G)(+)=0.98+/-0.01). Substituting neutral DPhPC with DPhPS, we demonstrate that the fixed charge of the host lipid has a small but measurable effect on the channel reversal potential. The available structural information allows for a qualitative explanation of our experimental findings. These findings now lead us to re-examine the ionization state of 102 titratable sites of the OmpF channel. Using standard methods of continuum electrostatics tailored to our particular purpose, we find the charge distribution in the channel as a function of solution acidity and relate the pH-dependent asymmetry in channel selectivity to the pH-dependent asymmetry in charge distribution. In an attempt to find a simple phenomenological description of our results, we also discuss different macroscopic models of electrodiffusion through large channels.
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PMID:Salting out the ionic selectivity of a wide channel: the asymmetry of OmpF. 1529 1

Neoxanthin, a major carotenoid in green leafy vegetables, was reported to exhibit potent antiproliferative effect via apoptosis induction on human prostate cancer cells. However, the metabolic fate of dietary neoxanthin in mammals remains unknown. In the present study, we investigated the gastrointestinal metabolism of neoxanthin in mice and the in vitro digestion of spinach, and estimated the antiproliferative effect of neoxanthin metabolites on PC-3 human prostate cancer cells. Two hours after the oral administration to mice of purified neoxanthin, unchanged neoxanthin and stereoisomers of neochrome (8'-R/S) were detected in the plasma, liver, and small intestinal contents. To estimate the effect of intragastric acidity on the conversion of dietary neoxanthin into neochrome (epoxide-furanoid rearrangement), spinach was digested in vitro by incubating it with a pepsin-HCl solution at pH 2.0 or 3.0 (gastric phase) followed by a pancreatin-bile salt solution (intestinal phase). Spinach neoxanthin was largely converted into (R/S)-neochrome during the digestion when the gastric phase was set at pH 2.0, whereas the rearrangement was observed to a lesser extent at pH 3.0. (R/S)-neochrome dose-dependently inhibited the proliferation of PC-3 cells as well as neoxanthin at concentrations < or = 20 micromol/L. Although neoxanthin induced evident apoptotic cell death, (R/S)-neochrome inhibited the cell proliferation without obvious apoptosis induction. These results indicate that dietary neoxanthin is partially converted into (R/S)-neochrome by intragastric acidity before intestinal absorption and that (R/S)-neochrome exhibits an antiproliferative effect on PC-3 cells by the induction of cytostasis.
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PMID:An epoxide-furanoid rearrangement of spinach neoxanthin occurs in the gastrointestinal tract of mice and in vitro: formation and cytostatic activity of neochrome stereoisomers. 1533 10

In a Tween 80-(NH4)2S04-xylenol orange liquid-solid extraction system, absorption spectra of complexes of metal ions in extraction phase with xylenol orange as the extractant were investigated. Compared to xylenol orange spectra, the maximum wavelength of complexes of Cu(II), U(VI) and Ce(IV) shifted to the red by 20-30 nm, while that of La (III) did not. With different acidity, quantites of xylenol orange and salt, and surfactant, the efficiencies of Cu(II), La(III), U(VI) and Ce(IV) metal ions were discussed. The results indicated that the complexes of Cu(II) and U(VI) with xylenol orange were almost completely extracted by the Tween-80 phase, that of Ce(IV) was partially extracted, while that of La(III) was not extracted from the aqueous solution of pH 6.0. The extraction separation of La(III) and U(VI) was carried out by controlling the solution acidity.
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PMID:[Study on the spectra and extractive performance of copper, lanthanum, uranium and cerium by tween-80-(NH4 )2S04-xylenol orange system]. 1576 96

Reactive uptake of glyoxal onto particulate matter has been studied in laboratory experiments in a 2 m3 Teflon reaction chamber. Inorganic seed particles of different composition were utilized, including (NH4)2SO4, (NH4)2SO4/ H2SO4, NaNO3, and simulated sea salt, while the relative humidity and acid concentration were varied. The organic composition of the growing particles was measured in situ with an aerosol mass spectrometer, providing particle mass spectra as a means of product identification. Aerosol physical characteristics were also measured with a differential mobility analyzer and condensation nucleus counter. Regardless of seed composition, particle growth was rapid and continuous over the course of several hours. Identification of several mass fragments greater than the glyoxal monomer suggested that heterogeneous reactionsto form glyoxal adducts of lowvolatility had occurred. Temporal analysis of the mass fragments was consistent with a proposed acid-catalyzed mechanism whereby glyoxal is first hydrated, followed by self-reaction to form cyclic acetal structures. Increased relative humidity slowed the formation of higher order oligomers, also consistent with the proposed mechanism. The relative contribution of various oligomers to the overall organic composition was strongly dependent on the relative humidity and hence the particulate water concentration. A mild acid catalysis was also observed upon increasing the acidity of the seed particles. Specific mass fragments were found that could only arise from sulfate esters and were not present on the non-sulfur-containing seed particles. This first evidence of the formation of organic sulfates in particles is presented together with a proposed mechanism and molecular structure. These results suggest that the formation of these products of glyoxal uptake can contribute significantly to secondary organic aerosol.
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PMID:Heterogeneous reactions of glyoxal on particulate matter: identification of acetals and sulfate esters. 1581 6

In polyethylene glycol 2000 (PEG)-(NH4)2 SO4-extractant (sodium diethyldithiocarbamate, DDC) two-phase aqueous systems, spectroscopic behaviour of complexes of Cu(II), La(III), U(VI) and Ce(IV) with DDC as the extractant in PEG phase and general water phase was investigated. Comparing to DDC spectrophotometry, the new method has the advantage that the maximum wavelength of complex of Cu(II) shifts to red wavelength. Extraction mechanism and existing form of complexes of metal ions in PEG phase were studied. Effects of different acidity, quantities of DDC and salt, different surfactant on the extraction efficiency of copper(II), lanthanum(III), uranium(VI) and cerium(IV) were discussed. Experimental results show that Cu(II) was almost completely extracted in PEG phase at pH 5-8, U(VI) was partly extracted at pH 1-11, while La(III) and Ce(IV) were not extracted at pH 3-6 buffer solution. So, extraction separation of Cu(II)-La(III) and Cu(II)-Ce(IV) was carried out by controlling the solution acidity.
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PMID:[The spectroscopic behaviour and extraction separation of Cu(II), La(III), U(VI) and Ce(IV) in two-phase aqueous systems]. 1582 47

Sibutramine mesylate is a new anti-obesity drug. It is a crystalline salt of sibutramine developed to improve the solubility of sibutramine hydrochloride. Methanesulfonic acid was used as a salt-forming acid instead of hydrochloric acid, resulting in a greatly improved solubility of 1000 mg/mL in water. Sibutramine mesylate was administered orally to ICR mice, Sprague-Dawley rats, and beagle dogs at dose levels of 1.15, 3.45, and 11.50 mg/kg to measure its effects on the central nervous system (CNS), general behaviour, cardiovascular-respiratory system and the other organ systems. Following administration of sibutramine mesylate, spontaneous locomotor activity was significantly increased from 120 min to 24 hours at 3.45 mg/kg and from 30 min to 24 hours at 11.50 mg/kg. Furthermore, there were a decrease in hexobarbital-induced sleep time, an increase in respiratory rate at 120 min, increases in intestinal transport capacity and gastric pH at 11.50 mg/kg, and decreases in gastric volume and total acidity at 3.45 and 11.50 mg/kg. However sibutramine mesylate caused no effects on general behaviour, motor coordination, body temperature, analgesia, convulsion, blood pressure, heart rate, electrocardiogram, cardiac functions of the isolated rat heart, isolated smooth muscles and renal function. Based on the above results, it was concluded that sibutramine mesylate caused effects on the spontaneous locomotor activity, hexobarbital-induced sleep time, respiration, gastrointestinal transport, and gastric secretion at a dose level of 3.45 mg/kg or greater but caused no effects on other general pharmacological reactions.
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PMID:Safety pharmacology of sibutramine mesylate, an anti-obesity drug. 1590 Oct 50


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