Gene/Protein Disease Symptom Drug Enzyme Compound
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Query: UMLS:C0220723 (PCA)
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Cu/ZnO supported on alumina is a well-known catalyst for steam reforming of methanol. In this work it is attempted to assess the influence of elemental composition on the resulting active copper phase. XAFS measurements of calcined precursors were carried out at the Cu K edge and the Zn K edge. Corresponding RDF show that both copper oxide and zinc oxide exhibit considerable deviations from a linear dependence of their structure on the composition coinciding with changes in phase composition of hydroxycarbonate precursor. From time-resolved in situ experiments at the Cu K edge the degree of reduction can be monitored using a combination of factor analysis (PCA) and least-squares XANES fitting with suitable reference spectra (e.g. Cu metal, Cu2O, and CuO). It is shown that Cu2O forms prior to Cu. The extent of reduction to Cu exhibited a typical nucleation growth behavior with an enhanced reaction rate for more diluted samples. Adding oxygen to the feed gas leads to the formation of mixed Cu2+ and Cu+ phases accompanied by a complete loss of activity in methanol steam reforming. After switching back to steam reforming conditions the activity is regained.
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PMID:In situ studies on the structure of copper oxide/zinc oxide catalysts. 1151 72

Pseudomonas fluorescens 2-79RN(10) protects wheat against take-all disease caused by Gaeumannomyces graminis var. tritici; however, the level of protection in the field varies from site to site. Identification of soil factors that exert the greatest influence on disease suppression is essential to improving biocontrol. In order to assess the relative importance of 28 soil properties on take-all suppression, seeds were treated with strain 2-79RN(10) (which produces phenazine-1-carboxylate [PCA(+)]) or a series of mutants with PCA(+) and PCA(-) phenotypes. Bacterized seeds were planted in 10 soils, representative of the wheat-growing region in the Pacific Northwest. Sixteen soil properties were correlated with disease suppression. Biocontrol activity of PCA(+) strains was positively correlated with ammonium-nitrogen, percent sand, soil pH, sodium (extractable and soluble), sulfate-sulfur, and zinc. In contrast, biocontrol was negatively correlated with cation-exchange capacity (CEC), exchangeable acidity, iron, manganese, percent clay, percent organic matter (OM), percent silt, total carbon, and total nitrogen. Principal component factor analysis of the 16 soil properties identified a three-component solution that accounted for 87 percent of the variance in disease rating (biocontrol). A model was identified with step-wise regression analysis (R(2) = 0.96; Cp statistic = 6.17) that included six key soil properties: ammonium-nitrogen, CEC, iron, percent silt, soil pH, and zinc. As predicted by our regression model, the biocontrol activity of 2-79RN(10) was improved by amending a soil low in Zn with 50 micro g of zinc-EDTA/g of soil. We then investigated the negative correlation of OM with disease suppression and found that addition of OM (as wheat straw) at rates typical of high-OM soils significantly reduced biocontrol activity of 2-79RN(10).
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PMID:Identification and manipulation of soil properties to improve the biological control performance of phenazine-producing Pseudomonas fluorescens. 1278 34

The impact of acid rock drainage (ARD) and eutrophication on microbial communities in stream sediments above and below an abandoned mine site in the Adelaide Hills, South Australia, was quantified by PLFA analysis. Multivariate analysis of water quality parameters, including anions, soluble heavy metals, pH, and conductivity, as well as total extractable metal concentrations in sediments, produced clustering of sample sites into three distinct groups. These groups corresponded with levels of nutrient enrichment and/or concentration of pollutants associated with ARD. Total PLFA concentration, which is indicative of microbial biomass, was reduced by >70% at sites along the stream between the mine site and as far as 18 km downstream. Further downstream, however, recovery of the microbial abundance was apparent, possibly reflecting dilution effect by downstream tributaries. Total PLFA was >40% higher at, and immediately below, the mine site (0-0.1 km), compared with sites further downstream (2.5-18 km), even after accounting for differences in specific surface area of different sediment samples. The increased microbial population in the proximity of the mine source may be associated with the presence of a thriving iron-oxidizing bacteria community as a consequence of optimal conditions for these organisms while the lower microbial population further downstream corresponded with greater sediments' metal concentrations. PCA of relative abundance revealed a number of PLFAs which were most influential in discriminating between ARD-polluted sites and the rest of the sites. These PLFA included the hydroxy fatty acids: 2OH12:0, 3OH12:0, 2OH16:0; the fungal marker: 18:2omega6; the sulfate-reducing bacteria marker 10Me16:1omega7; and the saturated fatty acids 12:0, 16:0, 18:0. Partial constrained ordination revealed that the environmental parameters with the greatest bearing on the PLFA profiles included pH, soluble aluminum, total extractable iron, and zinc. The study demonstrated the successful application of PLFA analysis to rapidly assess the toxicity of ARD-affected waters and sediments and to differentiate this response from the effects of other pollutants, such as increased nutrients and salinity.
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PMID:The use of phospholipid fatty acid analysis to measure impact of acid rock drainage on microbial communities in sediments. 1569 50

Zinc (Zn) is an essential nutrient, and its deficiency causes growth retardation, immunodeficiency, and neuronal degeneration. However, the precise roles and molecular mechanism(s) of Zn function in immune response have not been clarified. Mast cells (MCs) are granulated cells that play a pivotal role in allergic reactions and inflammation. The granules of MCs contain various chemical mediators and inflammatory cytokines that are released upon FcepsilonRI cross-linking. In this study, we report that Zn is essential for MC activation both in vitro and in vivo. We showed that a Zn chelator, N,N,N,N-tetrakis (2-pyridylmethyl) ethylenediamine, inhibited in vivo allergic reactions such as PCA and PSA. Consistent with this, N,N,N,N-tetrakis (2-pyridylmethyl) ethylenediamine significantly inhibited the FcepsilonRI-induced degranulation and cytokine production. We found that Zn was required for FcepsilonRI-induced translocation of granules to the plasma membrane, a process that we have shown to be important for MC degranulation. In addition, we showed that Zn was essential for plasma membrane translocation of protein kinase C and subsequent nuclear translocation of NF-kappaB, leading to cytokine production, such as IL-6 and TNF-alpha. These results revealed that Zn was involved in multiple steps of FcepsilonRI-induced MC activation and required for degranulation and cytokine production.
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PMID:Zinc is required for Fc epsilon RI-mediated mast cell activation. 1681 90

Use of a harmonised sampling regime has allowed comparison of concentrations of copper, chromium, nickel, lead and zinc in six urban parks located in different European cities differing markedly in their climate and industrial history. Wide concentrations ranges were found for copper, lead and zinc at most sites, but for chromium and nickel a wide range was only seen in the Italian park, where levels were also considerably greater than in other soils. As might be expected, the soils from older cities with a legacy of heavy manufacturing industry (Glasgow, Torino) were richest in potentially toxic elements (PTEs); soils from Ljubljana, Sevilla and Uppsala had intermediate metal contents, and soils from the most recently established park, in the least industrialised city (Aveiro), displayed lowest concentrations. When principal component analysis was applied to the data, associations were revealed between pH and organic carbon content; and between all five PTEs. When pH and organic carbon content were excluded from the PCA, a distinction became clear between copper, lead and zinc (the "urban" metals) on the one hand, and chromium and nickel on the other. Similar results were obtained for the surface (0-10 cm depth) and sub-surface (10-20 cm depth) samples. Comparisons with target or limit concentrations were limited by the existence of different legislation in different countries and the fact that few guidelines deal specifically with public-access urban soils intended for recreational use.
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PMID:Variability in concentrations of potentially toxic elements in urban parks from six European cities. 1707 23

Epidemiology and studies in animal models have revealed that prenatal malnutrition is highly correlated with abnormal fetal neurodevelopment. We present here a combined metabonomic and metallomic profiling technique to associate the metabolic and trace-elemental composition variations of rat amniotic fluid (AF) in malnourished pregnant rats with the retardation of fetal rat neurodevelopment. The AF samples from three groups of pregnant Sprague-Dawley rats, which were fed either a normal diet, a low-protein diet, or "a famine diet", were subjected to GC/MS and ICP/MS combined with multivariate data analysis (MVDA). PCA scores plot of both GC/MS and ICP/MS data showed similar and unique metabolic signatures of AF in response to the different diets. Rats in the famine group released increased amounts of glycine, inositol, putrescine, and rubidium and decreased amounts of methionine, dopa, tryptophan, glutamine, zinc, cobalt, and selenium in the AF. These discriminable variations in the AF may indicate the abnormality of a number of metabolic pathways in fetal rats including the folate cycle and methionine pathway, the monoamine pathway, and tri-iodothyronine (T3) metabolism. The abnormalities may be the result of metabolites or elemental differences or a combination of both. This study demonstrates the potential of combining profiling of small-molecule metabolites and trace elements to broaden the understanding of biological variations associated with fetal neurodevelopment induced by environmental perturbation.
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PMID:Metabonomic and metallomic profiling in the amniotic fluid of malnourished pregnant rats. 1834 12

Reduced collagen matrix in the dermis constitutes one of the characteristic features of chronologically aged skin, which is further enhanced on the sun-exposed portions of the body by chronic ultraviolet light (UV) irradiation, inducing the unique changes associated with skin photoageing. The zinc salt of l-pyrrolidone carboxylate (Zinc PCA) has long been used as a cosmetic ingredient, because of its astringent and anti-microbial properties. In the present study, by employing cultured normal human dermal fibroblasts, we found that Zinc PCA suppressed UVA-induced activation of activator protein-1 (AP-1) and reduced matrix metalloproteinase-1 production in these cells, which is thought to be involved in collagen degradation in photoaged skin. Moreover, Zinc PCA treatment of the cells increased the expression of an ascorbic acid transporter mRNA, SVCT2, but not SVCT1, resulting in the enhanced production of type I collagen. Based on these in vitro findings, we consider Zinc PCA to be a promising candidate for an anti-skin ageing agent.
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PMID:Zinc l-pyrrolidone carboxylate inhibits the UVA-induced production of matrix metalloproteinase-1 by in vitro cultured skin fibroblasts, whereas it enhances their collagen synthesis. 2183 44

This study examined the effects of soil physicochemical properties (including heavy metal pollution) and vegetation parameters on soil basal respiration, microbial biomass, and the activity and functional richness of culturable soil bacteria and fungi. In a zinc and lead mining area (S Poland), 49 sites were selected to represent all common plant communities and comprise the area's diverse soil types. Numerous variables describing habitat properties were reduced by PCA to 7 independent factors, mainly representing subsoil type (metal-rich mining waste vs. sand), soil fertility (exchangeable Ca, Mg and K, total C and N, organic C), plant species richness, phosphorus content, water-soluble heavy metals (Zn, Cd and Pb), clay content and plant functional diversity (based on graminoids, legumes and non-leguminous forbs). Multiple regression analysis including these factors explained much of the variation in most microbial parameters; in the case of microbial respiration and biomass, it was 86% and 71%, respectively. The activity of soil microbes was positively affected mainly by soil fertility and, apparently, by the presence of mining waste in the subsoil. The mining waste contained vast amounts of trace metals (total Zn, Cd and Pb), but it promoted microbial performance due to its inherently high content of macronutrients (total Ca, Mg, K and C). Plant species richness had a relatively strong positive effect on all microbial parameters, except for the fungal component. In contrast, plant functional diversity was practically negligible in its effect on microbes. Other explanatory variables had only a minor positive effect (clay content) or no significant influence (phosphorus content) on microbial communities. The main conclusion from this study is that high nutrient availability and plant species richness positively affected the soil microbes and that this apparently counteracted the toxic effects of metal contamination.
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PMID:Soil fertility and plant diversity enhance microbial performance in metal-polluted soils. 2307 70

In NW Spain, a European region with very high fire incidence and erosion risks, the effects on soils of a medium-to-high severity wildfire and two emergency stabilization techniques were studied. In burned plots (control, BS; seeded with cereal, BSS; straw mulched, BSM) and adjacent unburned plots (US), the topsoil (0-2 cm) pH and thirteen NH4Ac-DTPA extractable elements were evaluated at t = 0, 4, 8 and 12 months after the fire. Compared to US, fire increased by 0.3-0.5 units the soil pH which decrease slowly over time, but remaining significantly higher at t = 12 (BS, BSM, BSS>US). Ammonium nitrogen (N) levels were higher (p<0.05) in burned plots than in US, difference decreasing progressively from 48-fold (t = 0) to 25-fold (t = 12). Although no significant effect of fire was immediately observed, the extractable sodium (Na) and potassium (K) were higher (p<0.05) in burned plots than in US at t = 4 and t = 8, probably due to cation leaching from the overlying ash. Fire did not modify the extractable magnesium (Mg), but at t = 0 the extractable calcium (Ca) and phosphorous (P) were transiently and significantly higher in burned plots than in US. Extractable aluminum (Al), iron (Fe), copper (Cu), cobalt (Co) and zinc (Zn) were lower and manganese (Mn) was higher in burned plots than in US. Neither seeding nor mulching significantly modified the topsoil concentrations of the elements considered. The PCA revealed that BS, BSM and BSS became more similar to US over the study period due to a rapid decrease in extractable Ca and Mg and a slow decrease in extractable Mn and NH4(+)-N. At t = 12, the most notable differences between burned plots and US were in the concentrations of extractable Al and Zn. Data suggest that at least another 4-8 months will be required for full recovery of the burned plots to unburned conditions.
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PMID:Short and medium-term effects of a wildfire and two emergency stabilization treatments on the availability of macronutrients and trace elements in topsoil. 2495 Apr 98

Emissions from primary lead smelters have been recognized as one of the mainly factor which has contributed to the contamination of soils by metals. Less attention has been paid to volatile metalloids such as arsenic (As) which accompanies lead (Pb) smelting activities. One of the objectives of this study was to determine the As concentrations in various extracting solutions using a collection of urban soils located no far away from two former Pb and zinc plants in the North of France. The procedure for the determination of As, As(III), and As(V) with hydride vapor generator atomic absorption spectrometry was described in details. Pseudo-total concentrations of As in the studied soils ranged from 5.3 to 65.9 mg kg(-1). Good correlations were found between As and lead, zinc, and cadmium concentrations in soils. These depended on the soil uses and the soil distance from the source of contamination. Because the form of As may pose a health risk to human population, its speciation was determined in each urban top soils. Very good correlations were found between As(III) and As(V) versus As concentrations in soils studied, but the results did no permit to establish a relation between the location of soils and their uses. In contrast, it was shown that the highest mobility factor and lowest partitioning index values were related to the location. The mobilty of As depended on the assimilated phosphorus (P), carbonate contents, and pH. The percentages of the water-extractable As concentrations ranged from 0.3 to 3.0% of the As concentrations in soils. Very good positive correlations between water-extractable As(III) and As(V) versus water-extractable As concentrations were obtained. It was shown that the water-extractable As(III) concentrations depended on the soil uses. The results revealed that soils for which the As was the most mobile presented the highest water-extractable As concentrations. Principal component analysis indicated that mechanisms related to the release of As depended on the physico-chemical parameters of the soils, particularly on the assimilated P, organic matter, and/or iron oxides/hydroxides contents. Finally, the glasshouse experiments using ryegrass as plant model and three soils with similar physico-chemical parameters with regard to the PCA analysis showed that the water extracting solution could be a good indicator to evaluate the As phytoavailability.
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PMID:Arsenic mobility and speciation in contaminated kitchen garden and lawn soils: an evaluation of water for assessment of As phytoavailability. 2539 30


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