Gene/Protein Disease Symptom Drug Enzyme Compound
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Query: UMLS:C0033036 (APC)
 10,214 document(s) hit in 31,850,051 MEDLINE articles (0.00 seconds)

Residues 46 and 54 on pigeon cytochrome c 43-58 (p43-58) analogues function as agretopes (sites bound to MHC molecules). Phenylalanine (F) and alanine (A) at positions 46 and 54 on p43-58 respectively bind to I-Ab. Aspartic acid (D) and alanine at positions 46 and 54 respectively bind to I-Ak. To determine the allele specific binding sites (desetope (s)) on class II molecules that are correspondent to the agretopes of peptide antigen (Ag), we analyzed directly binding capacity of p43-58 analogues with glutamic acid (E) at the epitopic position 50 (50E) to L cell transfectants expressing recombinant I-A molecules between b and k types. An Ak binding peptide, 46D50E54A, bound to transfectant possessing amino acid sequence of k type on N-terminal half of alpha-helix of A alpha-chain irrespective of the b type sequence on the other part, whereas an Ab binding peptide, 46F50E54A, did not bind to these transfects. Thus, agretopic residue 46 of 46D50E54A peptides appeared to bind to N-terminal half of alpha-helix of A alpha-chain. To define critical residues for the allele specific peptide binding, we then analyzed peptide binding capacity of Ak mutants substituted one of four polymorphic residues between Ak and Ab molecules. An Ak mutant, Ak alpha(56A), where arginine (R) at position 56 of the Ak alpha-chains was substituted with alanine located at the same position 56 of the Ab alpha-chains hardly bound 46D50E54A. By contrast, the Ak alpha(56A) bound 46F50E54A. Furthermore, Ak restricted T cell hybridomas responded to 46F50E54A but not to 46D50E54A in the presence of the Ak alpha(56A) APC. Thus, an amino acid on the position 56 of A alpha-chain determines critically specificity of the allele specific peptide binding (desetope).
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PMID:[Analysis of the allele specific Ag-binding site on murine class II MHC]. 864 75

l-Phenylalanine serves as a building block for the biosynthesis of proteins, but also as a precursor for a wide range of plant-derived compounds essential for plants and animals. Plants can synthesize Phe within the plastids using arogenate as a precursor; however, an alternative pathway using phenylpyruvate as an intermediate, described for most microorganisms, has recently been proposed. The functionality of this pathway requires the existence of enzymes with prephenate dehydratase (PDT) activity (EC 4.2.1.51) in plants. Using phylogenetic studies, functional complementation assays in yeast and biochemical analysis, we have identified the enzymes displaying PDT activity in Pinus pinaster. Through sequence alignment comparisons and site-directed mutagenesis we have identified a 22-amino acid region conferring PDT activity (PAC domain) and a single Ala314 residue critical to trigger this activity. Our results demonstrate that all plant clades include PAC domain-containing ADTs, suggesting that the PDT activity, and thus the ability to synthesize Phe using phenylpyruvate as an intermediate, has been preserved throughout the evolution of plants. Moreover, this pathway together with the arogenate pathway gives plants a broad and versatile capacity to synthesize Phe and its derived compounds. PAC domain-containing enzymes are also present in green and red algae, and glaucophytes, the three emerging clades following the primary endosymbiont event resulting in the acquisition of plastids in eukaryotes. The evolutionary prokaryotic origin of this domain is discussed.
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PMID:Identification of a small protein domain present in all plant lineages that confers high prephenate dehydratase activity. 2712 54