Gene/Protein Disease Symptom Drug Enzyme Compound
Pivot Concepts:   Target Concepts:
Query: UMLS:C0017160 (gastroenteritis)
 11,398 document(s) hit in 31,850,051 MEDLINE articles (0.00 seconds)

The study was undertaken for antigenic characterization of rotavirus strains isolated from South African children. During July 1996-July 1997, an epidemiological surveillance of rotavirus-associated gastroenteritis was carried out in Pretoria and Gauteng provinces. In total, 1,229 diarrhoeal faecal samples were collected from a pathology laboratory. Of 389 (32%) rotavirus strains detected, most (97%) were group A rotaviruses by serological assay. However, 12 rotavirus strains identified did not apparently carry the common group A-specific antigen as determined by both commercial and monoclonal antibody-based ELISAs. Electrophoretic analysis of the viral RNA genome revealed that these strains shared a common electropherotype and that this resembled the group A rotavirus constellation of RNA segments. Furthermore, the conserved terminal sequences of the group A VP6 and VP7 genes could not be targeted by standard reverse transcriptase-polymerase chain reaction with a routine set of primers to the VP6 or VP7 genes. These strains present an interesting phenotypic variation of the recognized rotaviruses and warrant further characterization.
 ...
PMID:Atypical rotavirus identified from young children with diarrhoea in South Africa. 1176 74

Between June 4th and June 20th 1996 rotavirus, adenovirus, and astrovirus (HAstrV) were investigated in fecal samples from 27 children under three years old with acute diarrhea, attending the Bertha Lutz day care center, in Rio de Janeiro. All fecal samples were analyzed by polyacrylamide gel electrophoresis (PAGE), reverse transcriptase polymerase chain reaction (RT-PCR), enzyme immunoassays (EIA), and electron microscopy (EM). Nine of them (33%) showed positive results for HAstrV by at least one of the employed methodologies. Eight were positive by RT-PCR and EIA, and six by EM. All positive samples were inoculated onto HT-29 (human colon adenocarcinoma) cultured cells for HAstrV isolation and seven were positive after three passages. The sequencing analysis of eight RT-PCR products (449 bp) from gene that codifies VP2 protein, showed a total nucleotide identity among them and 98% with HAstrV-1 (strain Oxford type 1). This is the first report of a gastroenteritis outbreak associated with HAstrv-1 in a day care center in Rio de Janeiro and it reinforces the importance of this virus in association with infantile acute gastroenteritis.
 ...
PMID:An outbreak of gastroenteritis associated with astrovirus serotype 1 in a day care center, in Rio de Janeiro, Brazil. 1178 24

Norwalk-like viruses (NLVs), rotavirus and adenovirus are reportedly responsible from 4 to 42% of non-bacterial acute sporadic gastroenteritis. The incidence of NLVs, adenovirus and rotavirus infections in Indonesia is unclear. A total of 402 symptomatic cases from Indonesian patients with acute gastroenteritis and 102 asymptomatic controls that tested negative for bacteria and parasites were screened for the presence of NLVs, rotavirus and adenovirus using the reverse transcriptase-polymerase chain reaction (RT-PCR), Rotaclone kits and Adenoclone kits. Specific prototype probes were used to ascertain which NLV prototypes were present in the area. NLVs were detected in 45/218 (21%), rotavirus was detected in 170/402 (42%) and adenovirus was detected in 11/273 (4%) samples examined. Genetic analysis of the RT-PCR products using specific prototype probes for NLVs indicated that the prototypes were 42% Taunton agent and 58% Hawaii/Snow Mountain agent. Comparative data on patients showed that the incidence of rotavirus infections was two times greater than the NLVs infections, and that adenovirus infections were the least prevalent. All of the control samples tested were negative for NLVs and adenoviruses, however 8/70 (11%) of the samples were positive for rotaviruses. The high incidence of enteric viral-related infections is a threat among acute diarrheic patients in Jakarta, Indonesia.
 ...
PMID:Incidence of Norwalk-like viruses, rotavirus and adenovirus infection in patients with acute gastroenteritis in Jakarta, Indonesia. 1198 65

Sapporo-like viruses (SLV) are a causative agent of gastroenteritis in humans. SLV-specific primers were newly designed in capsid protein-coding region and 529 fecal samples collected from gastroenteritis patients were tested. Thirty-five samples (6.6%) were found to be positive by reverse transcriptase-polymerase chain reaction (RT-PCR). Out of 35 positive samples, 25 were classified into a genogroup SG-I, typified by the Sapporo virus, and 9 were classified as a genogroup SG-II, typified by the London virus. Interestingly, one sample could not be classified into any genogroup, which suggests that it may be part of a new SLV genogroup. The RT-PCR used in this study appeared to be capable of widely detecting SLV genogroups, and it was seen to be powerful enough for molecular epidemiological as well as phylogenetic studies on SLV.
 ...
PMID:Molecular epidemiology and phylogenetic analysis of Sapporo-like viruses. 1211 18

Norwalk-like viruses (NLVs) were detected using a nested reverse transcriptase-polymerase chain reaction (RT-PCR) with primers directed to the RNA polymerase region. Samples were examined from 11 separate outbreaks of gastroenteritis and five sporadic cases of childhood gastroenteritis between 1997 and 2000. Phylogenetic analysis of the 298 bp sequences showed that all strains belong to NLV genogroup II and the majority of the sequenced isolates (30/36) were members of the 95/96-US subset of strains associated with outbreaks recorded worldwide between 1995 and 1996. This was confirmed by analysis of the full length capsid region of a representative Australian isolate. This study demonstrates the usefulness of targeting primers for NLVs to the predominant circulating genotype(s) and confirms the spread of this subtype globally, including the Southern Hemisphere.
 ...
PMID:Norwalk-like virus 95/96-US strain is a major cause of gastroenteritis outbreaks in Australia. 1221 Apr 38

Porcine rotaviruses are a common cause of gastroenteritis. Several serotypes have been detected based on the two surface proteins VP4 (P-types) and VP7 (G-types). However, limited studies have been performed on the relative frequency of rotavirus types in diarrhetic pigs primarily because of the lack of availability of suitable methods. In this study, we describe a reverse transcriptase-polymerase chain reaction (RT-PCR) method for the typing of P and G types of rotavirus. This method allowed to detect G and P types in 96.8 and 87.1% of isolates collected in the United States, respectively and in 54.5 and 38.6% of isolates collected in Poland, respectively. Within the US specimens the G3, G4, G5, G9 and G10 types were detected in combination with P6 and P7 types while among Polish specimens only G3, G4 and G5 types in combination with P6 and P7 types were identified. In both instances the G4 and G5 were the most prevalent types. These studies show that a RT-PCR typing method is suitable for molecular epidemiological studies and that there is more diversity among porcine rotavirus than previously reported.
 ...
PMID:Survey of porcine rotavirus G and P genotype in Poland and the United States using RT-PCR. 1244 45

Several residents on a psychogeriatric ward developed vomiting and diarrhoea within a short time of each other. The causal factor was the highly contagious Norwalk-like virus (NLV) with a high rate of infection amongst both residents and staff (84%). This virus is the most frequent cause of gastroenteritis in institutions. The illness is self-limiting and can be transmitted from person to person. In weakened individuals the course can be serious. The virus can be detected in faeces with modern molecular-biological techniques (reverse transcriptase PCR). The revised law on infectious diseases ('Infectieziektenwet') was established in the Netherlands in 1999. This law requires major outbreaks of infectious diseases in institutions as described here to be reported to the Municipal Health Service. Together with this agency, strategies to prevent further spread of the disease can be implemented.
 ...
PMID:[An outbreak of vomiting and diarrhea in a nursing home caused by the Norwalk-like virus: implications of the Dutch law on infectious diseases and new diagnostic options]. 1251 15

The spike (S) glycoprotein of transmissible gastroenteritis virus (TGEV) is the predominant inducer of neutralizing antibodies and has been implicated in virulence and host cell tropism. In this study, the nucleotide and deduced amino acid sequences of the amino terminal half of the S glycoprotein gene of one Korean field TGEV strain (133) isolated in 1997 and three Korean field TGEV strains (KT2, KT3 and KT4) isolated in 2000 and HKT2 strain, KT2 passaged 104 times in ST cells, were determined. The amino terminal half of the S glycoprotein gene including antigenic sites A, B, C and D, were amplified by reverse transcriptase-polymerase chain reaction (RT-PCR). Amplified PCR products were cloned, sequenced, and compared with published sequences for non-Korean TGEV strains. Korea TGEV field strains had 98.5-99.5% nucleotide sequence and 97.2-99.0% amino acid sequence similarity with each other. They had 96.5-99.0% nucleotide sequence similarity and 94.9-97.6% amino acid sequence similarity compared to non-Korean TGEV strains. Korean TGEV strains had several specific nucleotide and amino acid sequences which were not found in foreign TGEV or PRCV strains. HKT2 strain differed by 0.89% in nucleotide and 2.03% amino acid sequences compared to original KT2 strain although the regions forming four antigenic sites were not changed. By phylogenetic tree analysis, Korean field TGEV strains were branched into different groups from non-Korean TGEV or PRCV strains. Korean TGEV field strains KT2 and 133 were branched in separate groups that were differentiated from the other Korean TGEV strains. The Korean TGEV strains seemed to be evolved from a separate lineage of TGEV strain.
 ...
PMID:Partial sequence of the spike glycoprotein gene of transmissible gastroenteritis viruses isolated in Korea. 1281 87

The authors, who are from the Vessel Sanitation Program of the Centers for Disease Control and Prevention (CDC), summarize the recent outbreaks of acute gastroenteritis (AGE), which occurred on five different cruise ships. Attack rates among passengers ranged from 4% to 13% and among crew members from 0.2% to 3.3%. Subsequent epidemiological investigations by the CDC suggested that the incidence was higher, approaching 19-41% of passengers. Overall there were 21 outbreaks of AGE on 17 cruise ships, of which nine were documented to be due to norovirus, three due to bacterial agents, and nine of unknown cause. In general, subsequent outbreaks on each cruise ship were of the identical strain of norovirus by reverse transcriptase polymerase reaction, which suggests an embedded source. The authors conclude that in addition to emphasizing basic food and water sanitation measures, control efforts should include thorough and prompt disinfection of ships during cruises and isolation of ill crew-members and passengers for 72 hours.
 ...
PMID:The agony and the ecstasy. 1449 95

Astrovirus is a small single strand RNA virus, that are associated with pediatric gastroenteritis. In order to detect astrovirus, latex agglutination test (LA) is simpler, more convenient and rapid diagnostic method for detection of viruses in stool specimens than that of electron microscopy (EM) or reverse transcriptase-polymerase chain reaction (RT-PCR). Latex reagents was developed with cultured astroviruses serotypes 1 and 3, and tested on rotaviruses- and adenoviruses-negative stool specimens between 1996 and 1998. Out of the 220 specimens, 23 were positive by both LA of serotype 1 and RT-PCR in 26 positive by RT-PCR. The sensitivity was 88.5%, the specificity was 97.9%. Four were positive by both LA of serotype 3 and RT-PCR. Though seroptype 3 LA needs to be improved, LA for screenings astrovirus is useful in rapidly detecting as a large number of screening test.
 ...
PMID:The development of sensitive latex agglutination tests for detecting astroviruses (serotypes 1 and 3) from clinical stool specimen. 1450 41


<< Previous 1 2 3 4 5 6 7 8 9 10 Next >>