Gene/Protein Disease Symptom Drug Enzyme Compound
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Query: EC:3.4.21.4 (trypsin)
 42,187 document(s) hit in 31,850,051 MEDLINE articles (0.00 seconds)

Treatment of a pig heart phosphoprotein phosphatase (phosphoprotein phosphohydrolase, EC 3.1.3.16) of Mr 224 000 with 40% ethanol followed by gel-filtration on Sephadex G-150, dissociated the enzyme into an active component of Mr 31 000 and an inactive component of Mr 80 000. The inactive component reassociated with the active component, resulting in the formation of an enzyme form of Mr 123 000. A large excess of either component in the reassociation produced only this enzyme form. The ability of the inactive component to associate with the active component was lost by treatment of the inactive component with trypsin and heat (60 degrees C, 2 min) but not with DNAase and RNAase. Effects of the inactive component on the activities of the active component by the association were as followings. The inactive component: (1) stimulated slightly the 32P-H2B histone phosphatase activity in the presence of either NaCl or Mg(CH3COO)2 but inhibited strongly in the absence of the salts; (2) stimulated the 32P-H1 histone phosphatase activity in the presence of the salts; (3) inhibited the phosphorylase a phosphatase activity in the presence and absence of the salts; (4) enhanced the response to the stimulatory effects of the salts on the dephosphorylation of 32P-histone; and (5) protected the phosphorylase a phosphatase activity from inhibition by the salts.
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PMID:Isolation of an inactive component from pig heart phosphoprotein phosphatase and its reassociation with an active component. 624 55

A partially purified pig heart phosphoprotein phosphatase was dissociated into three distinct components, namely alpha, beta, and gamma, by gel filtration on Sephacryl S-200 followed by chromatography on DEAE-Sephadex in the presence of 6 M urea. Although alpha itself had phosphatase activities toward P-H2B histone, P-H1 histone, phosphorylase a, and glycogen synthase b, beta and gamma had no activity toward these substrates even in the presence of 1 mM Mn2+. The beta component (Mr = 80,000) combined with alpha (Mr = 31,000) in the absence of urea to produce Form 2 (Mr = 123,000) with concomitant increase in P-H1 histone phosphatase activity and Mg2+ requirement for P-H2B histone phosphatase activity (Imazu, M., Imaoka, T., Usui, H., Kinohara, N., and Takeda, M. (1981) J. Biochem. 90, 851-862). The gamma component (Mr = 62,000) reassociated with Form 2 to produce Form 1 (Mr = 199,000) which was similar to the original phosphoprotein phosphatase in substrate specificity and Mg2+ requirement. Binding of gamma to Form 2 strongly suppressed the phosphatase activities toward phosphorylase a and glycogen synthase b with marginal effects on the other phosphatase activities and Mg2+ requirement. However, gamma alone could not associate with alpha. The gamma component was sensitive to treatment with heat (60 degrees C for 2 min) or trypsin and was resistant to treatment with DNase or RNase. The pig heart phosphoprotein phosphatase was further purified to near homogeneity, as judged by polyacrylamide gel electrophoresis. Sodium dodecyl sulfate gel electrophoresis revealed that the purified enzyme (Mr = 171,000) was composed of three polypeptide components, namely alpha', beta', and gamma' with molecular weights of 34,000, 69,000, and 56,000, respectively. The component stoichiometry was determined to be alpha' 1 beta' 1 gamma' 1 by densitometric tracing of the Coomassie blue-stained bands on the acrylamide gel. After dissociation of alpha ' and other components by gel filtration of the purified enzyme on Sephacryl S-200 in the presence of 6 M urea, one alpha ' combined with one beta' to produce Form 2' of Mr = 106,000. Since Form 1 and the purified enzyme as well as Form 2 and Form 2' had similar catalytic properties and s20,w values, respectively, component compositions are suggested to be alpha 1 beta 1 gamma 1 for Form 1 and alpha 1 beta 1 for Form Form 2.
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PMID:Resolution and reassociation of three distinct components from pig heart phosphoprotein phosphatase. 629 3

We characterized three monoclonal antibodies with histone reactivity which were derived from spleen cells obtained from unmanipulated NZB/NZW or MRL/1 mice. By using an enzyme-linked immunosorbent assay, we noted that all three antibodies reacted with chromatin histones as well as with total histones extracted from chromatin. None of the antibodies appeared to require DNA as part of the antigen. One antibody (BWH-1) recognized a determinant present in the nucleosome core H2A-H2B complex but showed little reactivity with any of the individual histones (H1, H2A, H2B, H3, or H4). In contrast, the other two monoclonal antibodies each recognized multiple individual histones in a unique pattern. Antibody MH-1 reacted with H2A, H2B, and H3; antibody MH-2 reacted with H2A, H3, and H4. MH-1 demonstrated cross-reactivity with poly-1-lysine but not poly-1-arginine or protamine sulfate; the opposite pattern of cross-reactivity was observed with MH-2. The antigenic determinants recognized by MH-2 were all trypsin-sensitive, suggesting that these determinants were present on the N-terminal regions of the respective individual histones. These studies revealed markedly different specificities of anti-histone monoclonal antibodies derived from murine models of systemic lupus erythematosus. These and other similarly derived antibodies may provide interesting tools to understand the specificity and biologic importance of anti-histone autoantibodies in different diseases.
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PMID:Monoclonal anti-histone autoantibodies derived from murine models of lupus. 633 55

Analysis of the total protein of the mature sperm of the bivalve mollusc Ensis minor (razor shell) using gel electrophoresis, amino acid analysis, nuclear magnetic resonance, circular dichroism and trypsin digestion, show it to contain all five histones plus a protamine-like protein. The histones H3, H4 and probably H2A are similar to those from calf thymus or sea urchin sperm, but the putative H2B appears to have a very high molecular mass (about 20 kDa). The histone H1 molecule is unusual, having little or no proline and 8-10 residues of histidine. The protamine-like species is rich in both lysine as well as arginine and is of much higher molecular mass than fish sperm protamines. Nucleosomes containing the four core histones have been prepared and the nucleosomal repeat shown to be 200 +/- 5 base pairs. Checks for the absence of contaminating cells reinforce the conclusion that a histone-containing nucleosomal structure co-exists with a protamine-like protein in this sperm chromatin.
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PMID:Proteins from the sperm of the bivalve mollusc Ensis minor. Co-existence of histones and a protamine-like protein. 664 28

A mouse monoclonal IgM antibody against the core histone H2B has been shown, by indirect immunofluorescence, to stain metaphase chromosomes from a variety of cultured cell types. Experiments carried out with human HeLa cells showed that the intensity of staining varied along the length of chromosome arms giving in some cases a rudimentary banded staining pattern. Considerable variation in staining intensity was noted between individual chromosomes and between different metaphase spreads. It was noted that chromosomes having a more swollen appearance stained more intensely than those with a more compact structure, which were often unstained. Preincubation of unfixed metaphase chromosomes in buffered salt solutions virtually eliminated the cell to cell and chromosome to chromosome variation in staining, even when no visible effect on chromosome morphology was caused by such treatment. It is concluded that the determinant recognised by antibody HBC-7 is ubiquitous but is inaccessible in some chromosomes or chromosome regions. Digestion of purified chromatin (primarily interphase) with DNAase 1 or micrococcal nuclease resulted in a several-fold increase in the binding of antibody HBC-7 measured by solid-phase radioimmunoassay. This increase was abolished by subsequent treatment with trypsin, which suggests that the antigenic determinant recognised by antibody HBC-7 lies in the trypsin-sensitive N-terminal region of nucleosomal H2B. As the cationic N-terminal regions of the core histones are involved in DNA binding, it is likely that the accessibility of the determinant recognised by antibody HBC-7 is influenced by the relationship between the core histones and their associated DNA.
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PMID:Immunofluorescent staining of human metaphase chromosomes with monoclonal antibody to histone H2B. 676 Oct 99

Gel electrophoretic analysis of the histone chemical acetylation in the nucleosome core particles with acetic andydride revealed availability of about 14 lysine residues of histone H2A, 15-21 of H2B, 8-11--H3 and 6-9--H4. Moderately lysine-rich histones H2A and H2B were found to be more susceptible to acetylation than arginine-rich H3 and H4. Chemical acetylation enhanced the rate of trypsin digestion in acetylated nucleosomes as evidenced by gel electrophoresis of histone fragments. A more pronounced trypsin digestion was evident at acetylation of only 3-5 histone amino groups per nucleosome. However, even heavily acetylated nucleosomes yielded in familiar trypsin limit digest pattern of histone fragments thus indicating persistence of histone octamer. Nucleosomes which were trace acetylated (up to 3-5 histone amino groups neutralized per nucleosome) and treated with trypsin to remove highly charged terminal histone regions revealed remarkable unfolding and partial dissociation when analyzed by gel electrophoresis. The same trace acetylated nucleosomes did not show such destabilization prior to trypsin digestion.
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PMID:[Chemical acetylation, trypsinolysis and stability of nucleosomes]. 684 37

Following a labeling period of 2 min, HeLa histones continue to accumulate in chromatin for 10 min, indicating the presence of a histone pool. During the accumulation period, H2A and H2B enter chromatin immediately, while entry of H3 and H4 is more prolonged. Association of newly synthesized core histones with chromatin does not necessarily indicate assembly. When 2-min [3H]lysine-labeled chromatin is exposed to 0.45 M NaCl, nearly half of the newly synthesized histones are dissociated, while mature core histones are stable. H2A and 70% of H2B are salt stable and remain with newly synthesized polynucleosomes. About 30% of H2B, 50% of H4, and all of H3 are salt labile; thus, both the new nucleosomal core histones and salt-labile new core histones are nonstoichiometric. Pulse-labeled core histones are more trypsin-sensitive than mature histones. When the salt-labile, newly synthesized histones are removed, the remaining proteins have the same trypsin sensitivity as bulk core protein. Examination of the tryptic peptides indicated that the increased trypsin sensitivity was due to complete destruction of the loosely associated core histones which undergo a lag prior to assembly. The altered order of appearance of two peptides in stripped, newly assembled nucleosomes indicates that the conformation in these particles is different from that in mature chromatin.
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PMID:In vivo assembly of newly synthesized histones. 703 Mar 92

Limited proteolysis of chromatin and its derivatives with trypsin results in stable fragments of histones containing up to 75% of the original number of amino acid residues. The protein moiety of trypsin-treated core particles from chicken erythrocyte chromatin was characterized. The amino acid analysis of purified histones fragments H2A, H2B and H4 revealed that they are similar to the corresponding products of proteolysis of erythrocyte chromatin histones, whose primary structure has already been established. The sequences 28--135 and 50--135 of histone H3 were identified within the trypsin-treated cord particles and their primary structure was established by peptide mapping. Data from amino acid analysis of the protein moiety of trypsin-treated core particles suggest that the bulk of the low molecular weight products of proteolysis corresponding to the N-terminal parts of histones is removed under conditions which facilitate the maintenance of nucleosomal structure of DNA in trypsin-digested core particles.
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PMID:[Products of limited proteolysis of chromatin core particles]. 709 72

The amino acid sequence of human spleen histone H4 was investigated as part of a study on histone evolution, following previous investigations of human spleen histones H2B (J. Biochem. 85, 615-624), H2A (J. Biochem. 88, 27-34), and H3 (J. Biochem. 90, 1205-1211). The H4 fraction was obtained as described previously and further purified by Bio-Gel P-60 chromatography. The purified H4 was digested with trypsin and the peptides were fractionated by repeated column chromatographies with reasonable recoveries. Certain peptides were sequenced, and three modified residues (alpha-N-Ac-Ser-1, epsilon-N-Ac-Lys-16, and epsilon-N-Me-Lys-20) and one heterogeneous residue (Asn/Asp-25), which is probably a result of postsynthetic deamidation, were found. Thus, the human H4 was deduced to have a sequence of 102 amino acid residues completely identical with that of calf thymus H4, including the presence of three modified residues and the absence of any variant sequence. It is concluded that the animal H4 sequences and their postsynthetic modifications have been strongly conserved during the evolutionary process leading to man, as strongly as or more strongly than the H3 sequence, and much more strongly than the H2A and H2B sequences.
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PMID:Human spleen histone H4. Isolation and amino acid sequence. 716 Dec 71

Using zero-length covalent protein-DNA crosslinking, we have mapped the histone-DNA contacts in nucleosome core particles from which the C- and N-terminal domains of histone H2A were selectively trimmed by trypsin or clostripain. We found that the flexible trypsin-sensitive C-terminal domain of histone H2A contacts the dyad axis, whereas its globular domain contacts the end of DNA in the nucleosome core particle. The appearance of the histone H2A contact at the dyad axis occurs only in the absence of linker DNA and does not depend on the absence of linker histones. Our results show the ability of the histone H2A C-terminal domain to rearrange. This rearrangement might play a biological role in nucleosome disassembly and reassembly and the retention of the H2A-H2B dimer (or the whole octamer) during the passing of polymerases through the nucleosome.
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PMID:Rearrangement of the histone H2A C-terminal domain in the nucleosome. 804 7


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