Gene/Protein Disease Symptom Drug Enzyme Compound
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Query: EC:3.4.21.1 (chymotrypsin)
 10,938 document(s) hit in 31,850,051 MEDLINE articles (0.00 seconds)

Penicillin acylase (EC 3.5.1.11) was completely inactivated with equimolar phenylmethane [35S]sulphonyl fluoride (PhMe35SO2F); the stability of the sulphonyl group in the modified protein was determined by measurement of the radioactivity in ultrafiltrates. In 8 M urea, the rate of loss of the sulphonyl group was similar to that observed in PhMeSO2F-inactivated chymotrypsin [Gold, A.M. & Fahrney, D. (1964) Biochemistry 3, 783-791]. Incubation of the PhMeSO2F-inactivated acylase with 0.7 M potassium thioacetate yielded an acetylthiol enzyme which was subsequently converted to a thiol-enzyme during incubation with 10 mM 6-aminopenicillanic acid. 4-Pyridyl-ethylcysteine was released by acid hydrolysis after reaction of the thiol-protein with 4-vinylpyridine. The rates of reaction of thiol-penicillin acylase with iodoacetic acid and 2,2'-dipyridyl disulphide were consistent with the presence of an incompletely accessible cysteinyl sidechain. After carboxymethylating the thiol-enzyme with iodo[2-3H]acetic acid, the label was shown by SDS/PAGE and sequencing analysis to be associated exclusively with the beta-chain NH2-terminal residue, indicating conversion of Ser290 to S-carboxymethyl-cysteine. Near-ultraviolet CD spectra showed the conformation of thiol-penicillin acylase to be indistinguishable from that of the native protein but the catalytic activity was less than 0.02% of that of the normal enzyme. The possibility that Ser290 acts as a nucleophile in catalysis is discussed.
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PMID:Site-directed chemical conversion of serine to cysteine in penicillin acylase from Escherichia coli ATCC 11105. Effect on conformation and catalytic activity. 184 24

Tick anticoagulant peptide (TAP) is a potent and selective inhibitor of blood coagulation factor Xa (Waxman, L., Smith, D.E., Arcuri, K.E., and Vlasuk, G.P. (1990) Science 248, 593-596). The 60-amino acid sequence of TAP shows limited homology to Kunitz-type inhibitors, including cysteines at positions 5, 15, 33, 39, 55, and 59. For detailed biochemical and pharmacological studies, a recombinant version of TAP (rTAP) has been produced in yeast. To determine the arrangement of the disulfide bonds, rTAP was cleaved with trypsin and chymotrypsin and the purified peptides sequenced using a gas-phase sequenator. The positions of the disulfide bonds were assigned by identifying the cycle(s) at which di-phenylthiohydan-toin-cystine was released. The specific disulfide bridges, Cys-5 to Cys-59, Cys-15 to Cys-39, and Cys-33 to Cys-55, are analogous to those in the prototype Kunitz-type inhibitor, bovine pancreatic trypsin inhibitor (BPTI). While treatment of BPTI with dithiothreitol rapidly and specifically reduced one disulfide bond, the reduction of disulfide bonds in rTAP proceeded at a slower rate and appeared to be nonspecific, reaching a maximum of two disulfides reduced. Reduced rTAP derivatized with either iodoacetic acid or iodoacetamide lost 59% of its inhibitory activity. In contrast, BPTI alkylated with iodoacetic acid inhibited trypsin half as well as the iodoacetamide derivative. Although the arrangement of disulfides in the two inhibitors is the same, their susceptibility to reduction is markedly different.
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PMID:Determination of disulfide bond pairs and stability in recombinant tick anticoagulant peptide. 185 93

In this paper, the characteristics of a highly stable, 34,000 molecular weight form of guinea pig (GP) acrosin are compared with those of acrosins from other mammalian species. GP acrosin, like acrosins from other species, is stable at pH 3.0, has a pH optimum of 8.0, and is inhibited by natural trypsin inhibitors and N-alpha-p-tosyl-L-lysine chloromethyl ketone. Its lack of inhibition by tosyl-phenylalanine chloromethyl ketone indicates that it has a specificity similar to trypsin but not chymotrypsin. The activity of GP acrosin was stimulated by Ca2+ below 75 mM. The enzyme was markedly inhibited by Hg2+, but only weakly inhibited by other metal cations. The disulfide reductants dithiothreitol and 2-mercaptoethanol both inhibited GP acrosin, as did the sulfhydryl reactant, iodoacetic acid. The Michaelis-Menten constant for GP testicular acrosin-catalyzed hydrolysis of the N-benzyloxycarbonyl-L-arginyl amide of 7-amino-4-trifluoromethylcoumarin at pH 8.0 was calculated from Lineweaver-Burk plots to give a value of Km = 2.0 x 10(-5) M with Vmax = 500 mumoles/min/mg protein. The corresponding lysine substrate, the N-benzyloxy-carbonyl L-lysine amide of 7-amino-4-trifluoromethyl-coumarin, had a higher Km = 4.6 x 10(-5) M and lower Vmax = 135 mumoles/min/mg protein, in accord with the substrate preference seen with other mammalian acrosins.(ABSTRACT TRUNCATED AT 250 WORDS)
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PMID:Guinea pig testicular proacrosin-acrosin system: further characterization of the active enzyme. 249 19

The enzyme rhodanese in the form without transferred sulfur, (E), was inactivated by carboxymethylation with iodoacetic acid (E.IAA), and its conformation was compared with that of E inactivated by oxidative processes (Eox). Formation of E.IAA led to the exposure of binding sites for the fluorescent apolar probe 1,1'-bi(4-anilino)naphthalene-5,5'-disulfonic acid (BisANS). The dissociation constant for BisANS decreased as the concentration of E.IAA decreased and ranged from approximately 200 microM at 1 mg/ml protein to approximately 2 microM at protein concentrations below 0.1 mg/ml. Centrifugation confirmed that E.IAA, but not the underivatized enzyme, could associate. E.IAA was proteolyzable by chymotrypsin or endoproteinase Glu C (V8), while rhodanese containing bound sulfur, ES, was totally refractory, and E was only clipped to a small extent. This constellation of consequences was only previously observed with oxidatively inactivated rhodanese. Fluorescence depolarization measurements of bound BisANS were consistent with exposure of apolar surfaces and association of the protein. The fluorescence spectra of BisANS bound to E.IAA or Eox were identical and distinct from the spectrum of BisANS bound to phenylglyoxal-inactivated ES. Digestion with chymotrypsin was followed using protein and BisANS fluorescence and showed a similar response for E.IAA and Eox. These results indicate that the consequences of forming Eox and E.IAA are very similar. Thus, reaction of the active site sulfhydryl group apparently triggers a conformational change leading to increased protein flexibility and increased exposure of hydrophobic surfaces. In the case of oxidation, the trigger might involve initial formation of an active site sulfenic acid which ultimately gives higher oxidation states that could include disulfides.
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PMID:Sulfhydryl-directed triggering of conformational changes in the enzyme rhodanese. 316 22

Colony-stimulating factor 1 (CSF-1) was purified from the serum-free conditioned medium of a human pancreatic carcinoma cell line (MIA PaCa-2) by a combination of conventional chromatography and high-performance liquid chromatography. The purity of human CSF-1 was demonstrated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) with a diffuse single band of Mr 42,000-50,000 and by N-terminal amino acid analysis of glutamate residue. The CSF-1 was stable at 50 degrees C for 30 min. It is sensitive to treatment with trypsin, chymotrypsin, and subtilisin but less sensitive to papain digestion. Treatment of CSF-1 with different glycosidases did not affect the biological activity. Sulfhydryl reagents such as dithiothreitol (DTT), iodoacetic acid, and N-ethylmaleimide did not affect the biological activity at the concentration of 1 mM. However, CSF-1 activity was inhibited totally by the combination of 10 mM DTT and 1 mM SDS. Under denaturing and reducing conditions, CSF-1 appeared on SDS-PAGE as a single protein band of Mr 21,000-25,000 and concurrently lost its activity, indicating that human CSF-1 possibly consists of two similar subunits and that the intact quaternary structure is essential for the biological activity. When treated with neuraminidase and endo-beta-D-N-acetylglucosaminidase D, the molecular weight of CSF-1 was reduced to 36,000-40,000, and to 18,000-20,000 in the presence of mercaptoethanol. Because of the specificity of endo-beta-D-N-acetylglucosaminidase D, it is suggested that the carbohydrate moieties are Asn-linked "complex-type" units.
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PMID:Purification and characterization of human colony-stimulating factor 1 from human pancreatic carcinoma (MIA PaCa-2) cells. 354 83

6-[(4-Bromo-2,3-dioxobutyl)thio]-6-deaminoadenosine 5'-diphosphate (6-BDB-TADP) has been shown to react at the reduced diphosphopyridine nucleotide (DPNH) inhibitory site of bovine liver glutamate dehydrogenase with incorporation of 1 mol of reagent/mol of enzyme subunit [Batra, S. P., & Colman, R. F. (1984) Biochemistry 23, 4940-4946]. The modified enzyme had lost one of the six free sulfhydryl groups per enzyme subunit as detected by 5,5'-dithiobis(2-nitrobenzoate). In the unmodified enzyme digested with trypsin, six cysteinyl peptides labeled with [14C]iodoacetic acid were detected by high-performance liquid chromatography (HPLC), whereas only five were observed in the 6-BDB-TADP-modified enzyme. A cysteinyl peptide has been isolated from modified enzyme digested with trypsin and chymotrypsin. Purification of the nucleotidyl peptide was accomplished by chromatography on phenyl boronate-agarose, followed by gel filtration on Sephadex G-25 and Bio-Gel P-4 in 50 mM ammonium bicarbonate, pH 8.0. The modified peptides were finally purified by HPLC on a C18 column using 0.1% trifluoroacetic acid with an acetonitrile gradient. By comparison of the amino acid composition and N-terminal residue of the isolated peptide with the known amino acid sequence of the enzyme, the peptide in the DPNH inhibitory site labeled by 6-BDB-TADP has been identified as the 19-membered fragment from Glu-311 to Lys-329. A unique residue, Cys-319, was identified as the reactive amino acid within the DPNH inhibitory site.
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PMID:Isolation and identification of cysteinyl peptide labeled by 6- [( 4-bromo-2,3-dioxobutyl)thio]-6-deaminoadenosine 5'-diphosphate in the reduced diphosphopyridine nucleotide inhibitory site of glutamate dehydrogenase. 371 40

Stem bromelain that had been irreversibly inhibited with 1,3-dibromo[2-(14)C]-acetone was reduced with sodium borohydride and carboxymethylated with iodoacetic acid. After digestion with trypsin and alpha-chymotrypsin three radioactive peptides were isolated chromatographically. The amino acid sequences around the cross-linked cysteine and histidine residues were determined and showed a high degree of homology with those around the active-site cysteine and histidine residues of papain and ficin.
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PMID:The amino acid sequence around the active-site cysteine and histidine residues of stem bromelain. 542 46

Papain that had been irreversibly inhibited with 1,3-dibromo[2-(14)C]acetone was reduced with sodium borohydride and carboxymethylated with iodoacetic acid. After digestion with trypsin and alpha-chymotrypsin the radioactive peptides were purified chromatographically. Their amino acid composition indicated that cysteine-25 and histidine-106 were cross-linked. Since cysteine-25 is known to be the active-site cysteine residue, histidine-106 must be the active-site histidine residue.
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PMID:The location of the active-site histidine residue in the primary sequence of papain. 567 31

Polyacrylamide gel electrophoresis shows that more than 80% of the total glucose-6-phosphate dehydrogenase activity of rat mammary homogenates exists as three dimeric forms. During lactation all three forms are present in equivalent amounts, but 24 h after the removal of the pups to stop lactation, there is a shift to the fastest migrating form (band I). During this period the ratio of enzyme activity to tissue glutathione concentration decreased. Using partially purified preparations of the enzyme it was shown that dithiothreitol could convert all the activity to the slowest migrating form (band III) and that diamide could reverse this change giving rise to band I only. Reduced glutathione could partially convert the enzyme to the band III form. Experiments using iodoacetic acid, iodoacetamide, p-chloromercuribenzoate, and mercuric chloride are also described. Based on these observations it is proposed that band I and band III represent fully oxidized and fully reduced forms of the enzyme, respectively, and band II a partially oxidized form. The oxidized and reduced forms are catalytically equivalent. However, the oxidized form is the most rapidly inactivated by chymotrypsin or mammary microsomes. Mammary microsomes can also catalyze the oxidation of the enzyme. The oxidation precedes the inactivation by microsomes and also occurs at lower microsome concentrations. It is proposed that the microsomal oxidation of the enzyme is the initial step in the turnover of the enzyme.
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PMID:Multiple molecular forms of rat mammary glucose-6-phosphate dehydrogenase: proposed role in turnover of the enzyme. 670 13

The alpha subunit of human chorionic gonadotropin (hCG) was partially reduced and S-alkylated with [2-14C]iodoacetic acid. The resulting derivative in which on the average 1.6 residues of cystine were modified was completely reduced and S-alkylated. The S-[14C]-carboxymethylated hCG-alpha was then subjected to hydrolysis with trypsin and the hydrolysate was fractionated by gel filtration. The radioactive fractions were further purified by high voltage paper electrophoresis at pH 4.7 to yield tryptic peptides, alpha T-1, alpha T-8, and alpha T-11a, containing 5, 2, and 3 S-carboxymethyl cysteinyl residues, respectively. These peptides were further fragmented by a variety of cleavage reagents such as cyanogen bromide, chymotrypsin, Staphylococcus aureus protease, subtilisin, and cathepsin C to isolate individual S-[14C]carboxymethylcysteine-containing peptides. After ensuring their purity, the specific radioactivity of each S-[14C]carboxymethylcysteine was determined following its isolation from the acid hydrolysate of the peptide by high voltage paper electrophoresis at pH 4.7. The 2 S-[14C]carboxymethylcysteine residues with identical specific radioactivity yielded the precise location of the disulfide bridge in the polypeptide chain. Thus, all five disulfide bonds in hCG-alpha were assigned and are located at positions 7 and 31, 10 and 32, 28 and 60, 59 and 87, and 82 and 84.
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PMID:Assignment of disulfide bonds in the alpha subunit of human chorionic gonadotropin. 741 Mar 74


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