Gene/Protein Disease Symptom Drug Enzyme Compound
Pivot Concepts:   Target Concepts:
Query: EC:3.1.30.1 (S1 nuclease)
 3,660 document(s) hit in 31,850,051 MEDLINE articles (0.00 seconds)

Adenosine deaminase (ADA; adenosine aminohydrolase, EC 3.5.4.4) deficiency is one cause of the genetic disease severe combined immunodeficiency. To identify mutations responsible for ADA deficiency, we synthesized cDNAs to ADA mRNAs from two cell lines, GM2756 and GM2825A, derived from ADA-deficient immunodeficient patients. Sequence analysis of GM2756 cDNA clones revealed a different point mutation in each allele that causes amino acid changes of alanine to valine and arginine to histidine. One allele of GM2825A also has a point mutation that causes an alanine to valine substitution. The other allele of GM2825A was found to produce an mRNA in which exon 4 had been spliced out but had no other detrimental mutations. S1 nuclease mapping of GM2825A mRNAs showed equal abundance of the full-length ADA mRNA and the ADA mRNA that was missing exon 4. Several of the ADA cDNA clones extended 5' of the major initiation start site, indicating multiple start sites for ADA transcription. The point mutations in GM2756 and GM2825A and the absence of exon 4 in GM2825A appear to be directly responsible for the ADA deficiency. Comparison of a number of normal and mutant ADA cDNA sequences showed a number of changes in the third base of codons. These changes do not affect the amino acid sequence. Analyses of ADA cDNAs from different cell lines detected aberrant RNA species that either included intron 7 or excluded exon 7. Their presence is a result of aberrant splicing of pre-mRNAs and is not related to mutations that cause ADA deficiency.
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PMID:Mutations in the human adenosine deaminase gene that affect protein structure and RNA splicing. 347 10

The human adenosine deaminase cDNA has been cloned in a lambda-vector. Contained within a sequence of over 1500 nucleotides is an open reading frame of 1089 nucleotides that encodes the amino acids of ADA. The functional ADA gene contains at least six kilobases and has at least two introns. Using in vitro translation, molecular hybridization to ADA cDNA, and S1 nuclease mapping, ADA mRNA has been characterized in lymphoblast lines from seven different ADA-deficient children. All of the lines contain substantial amounts of RNA, which hybridizes specifically to the ADA cDNA. Four of the cell lines contain translatable mRNAs with small defects such as single base substitutions that are not detectable by S1 mapping. Deficiency of ADA activity in these lines appears secondary to synthesis of structurally altered proteins containing simple amino acid substitutions. Three of the lines contain mRNAs with S1 nuclease detectable defects. Some or all of these defective mRNAs are postulated to result from anomalous RNA processing. In these cases the causes of the ADA deficiency may be more complex than simple amino acid substitutions in the protein and could include small insertions or deletions of amino acids as well as changes in the efficiency of translation of the mRNAs.
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PMID:Molecular biology of the adenosine deaminase gene and messenger RNA. 386 73