Gene/Protein Disease Symptom Drug Enzyme Compound
Pivot Concepts:   Target Concepts:
Query: EC:1.12.7.2 (hydrogenase)
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Spiral tubular bioreactors were constructed out of transparent PVC tubing for H2 production applications. Both a cyanobacterial Anabaena variabilis mutant that lacks uptake hydrogenase activity and the photosynthetic bacterium Rhodobacter sp. CBS were tested in the bioreactors. Continuous H2 photoproduction at an average rate of 19 mL min-2.h-1 was observed using the A. variabilis mutant under an air atmosphere (without argon sparging or application of a partial vacuum). The cyanobacterial photobioreactor was run continuously for over one month with an average efficiency of light energy conversion to H2 of 1.4%. Another H2-producing approach employed a unique type of activity found in a strain of photosynthetic bacteria that shifts CO (and H2O) into H2 (and CO2) in darkness. Continuous dark H2 production by Rhodobacter sp. CBS from CO (in anticipation of using synthesis gas as the future substrate) at rates up to 140 mL . g cdw-1 . h-1 was observed in a bubble-train bioreactor for more than 10 d.
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PMID:Spiral tubular bioreactors for hydrogen production by photosynthetic microorganisms : design and operation. 1857 12

We report here the sequencing and analysis of the genome of the purple non-sulfur photosynthetic bacterium Rubrivivax gelatinosus CBS. This microbe is a model for studies of its carboxydotrophic life style under anaerobic condition, based on its ability to utilize carbon monoxide (CO) as the sole carbon substrate and water as the electron acceptor, yielding CO2 and H2 as the end products. The CO-oxidation reaction is known to be catalyzed by two enzyme complexes, the CO dehydrogenase and hydrogenase. As expected, analysis of the genome of Rx. gelatinosus CBS reveals the presence of genes encoding both enzyme complexes. The CO-oxidation reaction is CO-inducible, which is consistent with the presence of two putative CO-sensing transcription factors in its genome. Genome analysis also reveals the presence of two additional hydrogenases, an uptake hydrogenase that liberates the electrons in H2 in support of cell growth, and a regulatory hydrogenase that senses H2 and relays the signal to a two-component system that ultimately controls synthesis of the uptake hydrogenase. The genome also contains two sets of hydrogenase maturation genes which are known to assemble the catalytic metallocluster of the hydrogenase NiFe active site. Collectively, the genome sequence and analysis information reveals the blueprint of an intricate network of signal transduction pathways and its underlying regulation that enables Rx. gelatinosus CBS to thrive on CO or H2 in support of cell growth.
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PMID:Genome annotation provides insight into carbon monoxide and hydrogen metabolism in Rubrivivax gelatinosus. 2547 13

Biological H2 production has potential to address energy security and environmental concerns if produced from renewable or waste sources. The purple non-sulfur photosynthetic bacterium Rubrivivax gelatinosus CBS produces H2 while oxidizing CO, a component of synthesis gas (Syngas). CO-linked H2 production is facilitated by an energy-converting hydrogenase (Ech), while a subsequent H2 oxidation reaction is catalyzed by a membrane-bound hydrogenase (MBH). Both hydrogenases contain [NiFe] active sites requiring 6 maturation factors (HypA-F) for assembly, but it is unclear which of the two annotated sets of hyp genes are required for each in R. gelatinosus CBS. Herein, we report correlated expression of hyp1 genes with Ech genes and hyp2 expression with MBH genes. Moreover, we find that while Ech H2 evolving activity is only delayed when hyp1 is deleted, hyp2 deletion completely disrupts MBH H2 uptake, providing a platform for a biologically driven water-gas shift reaction to produce H2 from CO.
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PMID:Inactivation of the uptake hydrogenase in the purple non-sulfur photosynthetic bacterium Rubrivivax gelatinosus CBS enables a biological water-gas shift platform for H2 production. 3096 74