| Time | Presentation
|
|---|
| 09:00-09:05 | Welcome and opening of the workshop (Prof. Jun-ichi Tsujii)
|
| 09:05-09:30 |
Morgan, A., Hirschman, L., Yeh, A. & Colosimo, M. "Gene Name Extraction
Using FlyBase Resources"
|
| 09:30-09:55 |
Widdows, D., Stanley, P., Cederberg, S., Chan, C.K., Steffen, D. &
Steffen, D. "Unsupervised Monolingual
and Bilingual Word-Sense Disambiguation of Medical Documents using UMLS"
|
| 09:55-10:20 |
Spasic, I., Nenadic, G. & Ananiadou, S.
"Using Domain-Specific Verbs for Term Classification"
|
| Time | Presentation
|
|---|
| 10:50-11:05 |
Hou, W. J. & Chen, H.H. " Enhancing Performance of Protein Name
Recognisers Using Collocation"
|
| 11:05-11:30 |
Lee, K.J., Hwang, Y.S. & Rim, H.C. "Two-Phase Biomedical NE Recognition
based on SVMs"
|
| 11:30-11:55 |
Tsuruoka, Y. & Tsujii, J. "Boosting Precision and Recall of
Dictionary-Based Protein Name Recognition"
|
| 11:55-12:10 |
Shen, D., Zhang, J., Zhou, G., Su, J. & Tan, C.L.
"Effective Adaptation of Hidden Markov Model-based Named Entity Recognizer
for biomedical Domain"
|
| 12:10-12:25 |
Koichi, T. & Collier, N. "Bio-medical Entity Extraction Using Support
Vector Machines"
|
| 12:25-12:40 |
Yamamoto, K., Kudo, T., Konagaya, A. & Matsumoto, Y.
"Protein Name Tagging for Biomedical Annotation in Text"
|
| Time | Presentation
|
|---|
| 14:00-14:50 |
Invited speaker
Friedman, C. "Opportunities and Challenges for NLP in Biomedicine"
|
| 14:50-15:05 |
Niu, Y., Hirst, G., McArthur, G. & Rodriguez-Gianolli, P.
"Answering Clinical Questions with Role Identification"
|
| 15:05-15:30 |
Mendonca, E.A., Haas, J., Shagina, L. Larson, E. & Friedman, C.
"Detecting Hospital-Acquired Pneumonia in Infants Using Natural Language
Processing of Radiology Reports"
|
| 15:30-15:45 |
Pakhomov, S.V., Buntrock, J. & Chute, C. "Identification of Patients
with Congestive Heart Failure using a Binary Classifier: a Case Study"
|
| Time | Presentation
|
|---|
| 16:10-16:25 |
Erjavec, T., Kim, J.D., Ohta, T., Tateisi, Y. & Tsujii, J.
" Encoding Biomedical Resources in TEI: The Case of the GENIA Corpus"
|
| 16:25-16:40 |
Bodenreider, O. & Pakhomov, S. "Exploring Adjectival Modification in
Biomedical Discourse Across Two Genres"
|
| 16:40-16:55 |
Torii, M., Kamboj, S. & Vijay-Shanker, K.
" An Investigation of Various Information Sources for Classifying
Biological Names"
|
| 16:55-17:10 |
Nenadic, G., Rice, S., Spasic, I., Ananiadou, S. & Stapley, B.
"Selecting Features for Text-based Classification: from Documents to Terms"
|
| 17:10-17:30 | Closing Session
|