Information Retrieval
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- Anne O'Tate
- a simple tool for submitting queries to PubMed and summarising the results obtained.
- askMEDLINE
- a natural language (English only) query tool for MEDLINE incorporating a spell checker.
- Author-ity
- a tool for authorship orientated querying of PubMed.
- BioIE
- a MEDLINE article search and key-sentence extraction tool.
- Carrot2
- A research framework for experimenting with the querying of online data sources and clustering search results to aid in their visualization.
- CrossRef
- an infrastructure for linking citations across publisher databases.
- eTBlast
- a MEDLINE based search tool which accepts entire paragraphs as input and returns MEDLINE abstracts that are similar to it.
- HONselect
- a searchable database of accredited medical information resources on the web.
- PICO
- a MEDLINE/PubMed based clinical data search tool.
- PubMatrix
- "PubMatrix is a simple way to rapidly and systematically compare any list of terms against any other list of terms in PubMed. It reports back the frequency of co-occurrence between all pairwise comparisons between the two lists as a matrix table."
- SUM Search
- a clinical data search tool. Similar to PubMed clinical queries
- Vivisimo
- a PubMed search tool that clusters articles by their determined topic similarity.
- Whatizit
- Developed by the Rebholz Group, EBI, WHATIZIT is a tool for linking biomedical terms in text documents to corresponding databases at the EBI and NCBI.
Featured News
- Invited talk at the 8th Annual Women in Data Science Event at the American University of Beirut
- Invited talk at the 2nd Symposium on NLP for Social Good (NSG), University of Liverpool
- Postdoctoral research position in Athens, Greece. Application deadline: 18th March 2024
- Four-year funded PhD in collaboration with A*STAR, Singapore. Deadline 20 March 2024
- PhD opportunity in collaboration with Athens Univ. of Economics and Business. Deadline 31 Mar 2024
- iCASE EPSRC funded PhD- multimodal NLP - UoM & BAE - Application deadline 30th March 2024
- CFP: BIONLP 2024 and Shared Tasks @ ACL 2024
- Advances in Data Science and Artificial Intelligence Conference 2024
- New review article on emotion detection for misinformation
Other News & Events
- Invited talk at Annual Meeting of the Danish Society of Occupational and Environmental Medicine
- BioNLP 2024 accepted as workshop at ACL 2024
- Junichi Tsujii awarded Order of the Sacred Treasure, Gold Rays with Neck Ribbon
- Chinese Government AwardAward for PhD student Tianlin Zhang
- Keynote talk at EMBL-EBI industry club Machine Learning for Text Mining